Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Lsm1Q8VC85 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
Lsm1Q8VC85 AC127371.2-201ENSMUST00000228108 1933 ntBASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Gm25418-201ENSMUST00000104214 129 ntBASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Gm13491-201ENSMUST00000118267 235 ntBASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Gm11790-201ENSMUST00000119569 455 ntBASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Gm22725-201ENSMUST00000158092 110 ntBASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Mir6973b-201ENSMUST00000184185 80 ntBASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Mir7687-201ENSMUST00000184722 59 ntBASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Gm29556-201ENSMUST00000187591 696 ntBASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Igkv3-8-201ENSMUST00000197635 339 ntBASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Gm44048-201ENSMUST00000204531 361 ntBASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Lsm1Q8VC85 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Lsm1Q8VC85 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Lsm1Q8VC85 AC168056.3-201ENSMUST00000225395 2540 ntBASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Lsm1Q8VC85 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Gm23746-201ENSMUST00000104229 125 ntBASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Gm14369-201ENSMUST00000121355 285 ntBASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Gm22106-201ENSMUST00000122544 127 ntBASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Gm22923-201ENSMUST00000174952 110 ntBASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Gm9320-201ENSMUST00000184151 473 ntBASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Mrgpra14-201ENSMUST00000189782 913 ntBASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Gm37837-201ENSMUST00000191743 604 ntBASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Gm37243-201ENSMUST00000193407 595 ntBASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Gm43144-201ENSMUST00000198256 485 ntBASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Lsm1Q8VC85 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Gm19617-201ENSMUST00000202977 308 ntBASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Gm43974-201ENSMUST00000205080 684 ntBASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Gm45026-201ENSMUST00000205292 833 ntBASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Lsm1Q8VC85 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC4.69□□□□□ -1.66
Lsm1Q8VC85 AC126554.4-201ENSMUST00000221055 409 ntBASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Gm9269-201ENSMUST00000221661 578 ntBASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Gm7040-201ENSMUST00000223271 443 ntBASIC4.69□□□□□ -1.66
Lsm1Q8VC85 AC164315.1-201ENSMUST00000226452 708 ntBASIC4.69□□□□□ -1.66
Lsm1Q8VC85 AC106830.1-201ENSMUST00000228032 1003 ntBASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Gm24166-201ENSMUST00000082724 135 ntBASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Gm42440-201ENSMUST00000197906 2284 ntBASIC4.69□□□□□ -1.66
Lsm1Q8VC85 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Lsm1Q8VC85 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Lsm1Q8VC85 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Lsm1Q8VC85 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC4.68□□□□□ -1.66
Lsm1Q8VC85 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.68□□□□□ -1.66
Lsm1Q8VC85 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 103.8 ms