Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC5.55□□□□□ -1.52
Ccdc38Q8CDN8 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Ccdc38Q8CDN8 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Ccdc38Q8CDN8 Gm23459-201ENSMUST00000083259 131 ntBASIC5.55□□□□□ -1.52
Ccdc38Q8CDN8 Mir365-2-201ENSMUST00000083555 112 ntBASIC5.55□□□□□ -1.52
Ccdc38Q8CDN8 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc38Q8CDN8 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc38Q8CDN8 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc38Q8CDN8 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc38Q8CDN8 Gm43266-201ENSMUST00000201049 1771 ntBASIC5.55□□□□□ -1.52
Ccdc38Q8CDN8 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Mir879-201ENSMUST00000104703 76 ntBASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Gm8202-201ENSMUST00000117682 310 ntBASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Gm14601-201ENSMUST00000120892 236 ntBASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Gm22106-201ENSMUST00000122544 127 ntBASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Gm11507-201ENSMUST00000156462 412 ntBASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Gm24216-201ENSMUST00000158259 117 ntBASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Gm9027-201ENSMUST00000165914 661 ntBASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Gm20401-201ENSMUST00000173717 212 ntBASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Gm43825-201ENSMUST00000199650 734 ntBASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 AC124408.1-201ENSMUST00000228938 707 ntBASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Svet1-201ENSMUST00000209370 3940 ntBASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Gm42455-201ENSMUST00000199761 2736 ntBASIC5.54□□□□□ -1.52
Ccdc38Q8CDN8 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Gm15166-201ENSMUST00000120790 385 ntBASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Gm12288-201ENSMUST00000121054 1282 ntBASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Mir7687-201ENSMUST00000184722 59 ntBASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Gm42694-201ENSMUST00000196951 358 ntBASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Gm44048-201ENSMUST00000204531 361 ntBASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Gm8999-201ENSMUST00000204951 969 ntBASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Gm44690-201ENSMUST00000207984 382 ntBASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Gm44683-201ENSMUST00000209088 484 ntBASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 AC138284.2-201ENSMUST00000213982 567 ntBASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Gm15189-201ENSMUST00000121164 1966 ntBASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Ccdc38Q8CDN8 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms