Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Mrgpra14-201ENSMUST00000189782 913 ntBASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm7496-201ENSMUST00000192573 1034 ntBASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm37934-201ENSMUST00000192902 402 ntBASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm5309-201ENSMUST00000197416 677 ntBASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm6362-201ENSMUST00000217686 836 ntBASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 AC156574.2-201ENSMUST00000228023 282 ntBASIC6.17□□□□□ -1.42
Vps53Q8CCB4 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm22807-201ENSMUST00000082737 129 ntBASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Mir30b-201ENSMUST00000083542 96 ntBASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm37400-201ENSMUST00000193148 3605 ntBASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm11743-201ENSMUST00000117385 1735 ntBASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Gm38351-201ENSMUST00000195466 2518 ntBASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Gm14874-201ENSMUST00000118995 438 ntBASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Gm12281-201ENSMUST00000119536 298 ntBASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Gm15534-201ENSMUST00000137642 562 ntBASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Gm25557-201ENSMUST00000158084 315 ntBASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Gm17061-201ENSMUST00000163167 499 ntBASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC6.16□□□□□ -1.42
Vps53Q8CCB4 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Gm27543-201ENSMUST00000183562 177 ntBASIC6.16□□□□□ -1.42
Vps53Q8CCB4 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Gm38360-201ENSMUST00000195130 454 ntBASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Igkv15-101-201ENSMUST00000195917 299 ntBASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Gm9317-201ENSMUST00000197055 862 ntBASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Gm43596-201ENSMUST00000202818 884 ntBASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Gm44214-201ENSMUST00000204153 606 ntBASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Gm17911-201ENSMUST00000210806 877 ntBASIC6.16□□□□□ -1.42
Vps53Q8CCB4 AL929285.1-201ENSMUST00000215522 229 ntBASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC6.16□□□□□ -1.42
Vps53Q8CCB4 CT030182.2-201ENSMUST00000223569 620 ntBASIC6.16□□□□□ -1.42
Vps53Q8CCB4 AC124549.1-201ENSMUST00000225912 333 ntBASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Gm22575-201ENSMUST00000082981 110 ntBASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Gm19035-201ENSMUST00000193299 1742 ntBASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Vps53Q8CCB4 Gm43024-201ENSMUST00000196770 4352 ntBASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Vps53Q8CCB4 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms