Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Gm37115-201ENSMUST00000193750 2849 ntBASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Gm16106-201ENSMUST00000119187 294 ntBASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Gm25290-201ENSMUST00000122796 144 ntBASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Gm21756-201ENSMUST00000178380 930 ntBASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Gm21405-201ENSMUST00000179024 930 ntBASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Mir6903-201ENSMUST00000183597 88 ntBASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Gm21191-201ENSMUST00000186484 930 ntBASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Gm29503-201ENSMUST00000191044 930 ntBASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Gm42458-201ENSMUST00000201914 369 ntBASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 AC211878.5-201ENSMUST00000221697 409 ntBASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Mir338-201ENSMUST00000083666 98 ntBASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Gm38264-201ENSMUST00000194850 2032 ntBASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Gm12285-201ENSMUST00000117347 233 ntBASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Gm12041-201ENSMUST00000121606 602 ntBASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Gm13007-201ENSMUST00000121866 365 ntBASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Mir1946b-201ENSMUST00000157853 133 ntBASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Gm22940-201ENSMUST00000158560 155 ntBASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Gm17086-201ENSMUST00000171346 484 ntBASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Gm9457-201ENSMUST00000180176 372 ntBASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Gm18558-201ENSMUST00000186253 1214 ntBASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Gm36986-201ENSMUST00000195320 353 ntBASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Gm22897-202ENSMUST00000197782 127 ntBASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Trav3-2-201ENSMUST00000198999 305 ntBASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Gm43596-201ENSMUST00000202818 884 ntBASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Gm44816-201ENSMUST00000206666 477 ntBASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Gm19201-201ENSMUST00000210127 778 ntBASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Supt4b-201ENSMUST00000214434 351 ntBASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 AC153961.2-201ENSMUST00000218877 164 ntBASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 AC112142.1-206ENSMUST00000228136 982 ntBASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Gm37099-201ENSMUST00000191902 3451 ntBASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Upf3bQ3ULL6 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 BC055308-201ENSMUST00000193380 2538 ntBASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Gm14082-201ENSMUST00000118582 801 ntBASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Gm16107-201ENSMUST00000162523 862 ntBASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Gm25025-201ENSMUST00000175018 111 ntBASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Gm27160-201ENSMUST00000184837 199 ntBASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Vmn1r82-202ENSMUST00000191002 918 ntBASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Gm6546-201ENSMUST00000192096 766 ntBASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Gm42579-201ENSMUST00000200512 734 ntBASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Gm43036-201ENSMUST00000200594 373 ntBASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms