Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC4.84□□□□□ -1.63
Trafd1Q3UDK1 Supt4b-201ENSMUST00000214434 351 ntBASIC4.84□□□□□ -1.63
Trafd1Q3UDK1 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC4.84□□□□□ -1.63
Trafd1Q3UDK1 AC211878.2-201ENSMUST00000222486 488 ntBASIC4.84□□□□□ -1.63
Trafd1Q3UDK1 AC154838.2-201ENSMUST00000226602 747 ntBASIC4.84□□□□□ -1.63
Trafd1Q3UDK1 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Trafd1Q3UDK1 Gm4963-201ENSMUST00000072718 378 ntBASIC4.84□□□□□ -1.63
Trafd1Q3UDK1 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Trafd1Q3UDK1 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Trafd1Q3UDK1 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Trafd1Q3UDK1 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Trafd1Q3UDK1 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
Trafd1Q3UDK1 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Trafd1Q3UDK1 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC4.84□□□□□ -1.64
Trafd1Q3UDK1 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Gm11200-201ENSMUST00000121698 448 ntBASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Gm23327-201ENSMUST00000157420 78 ntBASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Ighv1-3-201ENSMUST00000192764 302 ntBASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Gm17766-201ENSMUST00000209223 442 ntBASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Gm19170-201ENSMUST00000212440 1084 ntBASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Gm40598-201ENSMUST00000222953 547 ntBASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 CT030662.2-201ENSMUST00000226942 805 ntBASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 AC131997.2-201ENSMUST00000227452 362 ntBASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Gm6177-201ENSMUST00000085589 465 ntBASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Gm10727-201ENSMUST00000197107 1602 ntBASIC4.83□□□□□ -1.64
Trafd1Q3UDK1 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Gm25418-201ENSMUST00000104214 129 ntBASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Gm16106-201ENSMUST00000119187 294 ntBASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Gm22730-201ENSMUST00000158085 171 ntBASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Gm9457-201ENSMUST00000180176 372 ntBASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Gm5842-201ENSMUST00000195073 622 ntBASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Gm43655-201ENSMUST00000197367 222 ntBASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 AC142113.2-201ENSMUST00000217425 748 ntBASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 AC152169.2-201ENSMUST00000224558 613 ntBASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 AC154738.4-201ENSMUST00000228310 414 ntBASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Desi2-202ENSMUST00000069568 1193 ntBASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 AC102847.2-201ENSMUST00000227799 2906 ntBASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trafd1Q3UDK1 Gm43085-201ENSMUST00000202859 3132 ntBASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Gm11909-201ENSMUST00000121424 759 ntBASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms