Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Gabpb1Q00420 Mir1188-201ENSMUST00000116756 120 ntBASIC5.05□□□□□ -1.6
Gabpb1Q00420 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC5.05□□□□□ -1.6
Gabpb1Q00420 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Gabpb1Q00420 Gm20545-201ENSMUST00000174739 210 ntBASIC5.05□□□□□ -1.6
Gabpb1Q00420 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Gabpb1Q00420 Mir6416-201ENSMUST00000183664 117 ntBASIC5.05□□□□□ -1.6
Gabpb1Q00420 Gm28957-201ENSMUST00000190174 373 ntBASIC5.05□□□□□ -1.6
Gabpb1Q00420 Gm37884-201ENSMUST00000191857 818 ntBASIC5.05□□□□□ -1.6
Gabpb1Q00420 Gm18426-201ENSMUST00000191874 973 ntBASIC5.05□□□□□ -1.6
Gabpb1Q00420 Gm42694-201ENSMUST00000196951 358 ntBASIC5.05□□□□□ -1.6
Gabpb1Q00420 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Gabpb1Q00420 Gm43712-201ENSMUST00000198020 291 ntBASIC5.05□□□□□ -1.6
Gabpb1Q00420 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Gabpb1Q00420 Gm45072-201ENSMUST00000208673 929 ntBASIC5.05□□□□□ -1.6
Gabpb1Q00420 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.05□□□□□ -1.6
Gabpb1Q00420 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.05□□□□□ -1.6
Gabpb1Q00420 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Gabpb1Q00420 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC5.05□□□□□ -1.6
Gabpb1Q00420 AC131720.3-201ENSMUST00000219113 275 ntBASIC5.05□□□□□ -1.6
Gabpb1Q00420 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC5.05□□□□□ -1.6
Gabpb1Q00420 AC121912.1-201ENSMUST00000227525 1201 ntBASIC5.05□□□□□ -1.6
Gabpb1Q00420 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Gabpb1Q00420 Olfr480-201ENSMUST00000071658 1029 ntBASIC5.05□□□□□ -1.6
Gabpb1Q00420 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Gabpb1Q00420 Gm23623-201ENSMUST00000082461 107 ntBASIC5.05□□□□□ -1.6
Gabpb1Q00420 Olfr1160-201ENSMUST00000099839 960 ntBASIC5.05□□□□□ -1.6
Gabpb1Q00420 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Gabpb1Q00420 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.05□□□□□ -1.6
Gabpb1Q00420 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.05□□□□□ -1.6
Gabpb1Q00420 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Gabpb1Q00420 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Gabpb1Q00420 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm25419-201ENSMUST00000104215 191 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm14575-201ENSMUST00000117210 560 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm15012-201ENSMUST00000119176 106 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm15493-201ENSMUST00000119461 528 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm11790-201ENSMUST00000119569 455 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm15022-201ENSMUST00000122074 746 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm25293-201ENSMUST00000122792 285 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm7335-201ENSMUST00000172475 373 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm5777-201ENSMUST00000177265 448 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm8669-201ENSMUST00000183839 945 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 Dlx6os1-204ENSMUST00000184182 146 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm37241-201ENSMUST00000191736 523 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm43408-201ENSMUST00000198263 440 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm42625-201ENSMUST00000198611 922 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm18325-201ENSMUST00000203228 835 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm44849-201ENSMUST00000207595 484 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm19256-201ENSMUST00000218550 231 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm40692-201ENSMUST00000220411 491 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm7822-201ENSMUST00000222433 581 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 Zfp429-203ENSMUST00000224684 524 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC5.04□□□□□ -1.6
Gabpb1Q00420 Gm45885-202ENSMUST00000211520 1383 ntBASIC5.04□□□□□ -1.6
Gabpb1Q00420 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Gabpb1Q00420 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.03□□□□□ -1.6
Gabpb1Q00420 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Gabpb1Q00420 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Gabpb1Q00420 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Gabpb1Q00420 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Gabpb1Q00420 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Gabpb1Q00420 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms