Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 AC131033.2-201ENSMUST00000228138 1011 ntBASIC5.39□□□□□ -1.55
NcanP55066 AC122035.2-201ENSMUST00000228698 462 ntBASIC5.39□□□□□ -1.55
NcanP55066 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
NcanP55066 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
NcanP55066 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.39□□□□□ -1.55
NcanP55066 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NcanP55066 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC5.39□□□□□ -1.55
NcanP55066 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
NcanP55066 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
NcanP55066 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NcanP55066 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NcanP55066 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NcanP55066 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.39□□□□□ -1.55
NcanP55066 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NcanP55066 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
NcanP55066 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
NcanP55066 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
NcanP55066 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
NcanP55066 Naip3-201ENSMUST00000118082 4208 ntBASIC5.38□□□□□ -1.55
NcanP55066 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
NcanP55066 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
NcanP55066 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NcanP55066 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
NcanP55066 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
NcanP55066 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.38□□□□□ -1.55
NcanP55066 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.38□□□□□ -1.55
NcanP55066 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NcanP55066 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
NcanP55066 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NcanP55066 Xpo7-203ENSMUST00000226448 3663 ntBASIC5.38□□□□□ -1.55
NcanP55066 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
NcanP55066 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
NcanP55066 Gm37703-201ENSMUST00000192292 1784 ntBASIC5.38□□□□□ -1.55
NcanP55066 Gm13220-201ENSMUST00000121535 508 ntBASIC5.38□□□□□ -1.55
NcanP55066 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC5.38□□□□□ -1.55
NcanP55066 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
NcanP55066 Gm28655-201ENSMUST00000191538 692 ntBASIC5.38□□□□□ -1.55
NcanP55066 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC5.38□□□□□ -1.55
NcanP55066 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC5.38□□□□□ -1.55
NcanP55066 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC5.38□□□□□ -1.55
NcanP55066 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC5.38□□□□□ -1.55
NcanP55066 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NcanP55066 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NcanP55066 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
NcanP55066 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.38□□□□□ -1.55
NcanP55066 AC124408.1-201ENSMUST00000228938 707 ntBASIC5.38□□□□□ -1.55
NcanP55066 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
NcanP55066 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
NcanP55066 Gm10145-201ENSMUST00000077776 462 ntBASIC5.38□□□□□ -1.55
NcanP55066 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NcanP55066 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
NcanP55066 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
NcanP55066 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
NcanP55066 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
NcanP55066 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
NcanP55066 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
NcanP55066 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NcanP55066 Gm43588-201ENSMUST00000201862 2298 ntBASIC5.37□□□□□ -1.55
NcanP55066 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
NcanP55066 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
NcanP55066 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
NcanP55066 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
NcanP55066 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.37□□□□□ -1.55
NcanP55066 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.37□□□□□ -1.55
NcanP55066 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NcanP55066 Gm22473-201ENSMUST00000104114 132 ntBASIC5.37□□□□□ -1.55
NcanP55066 Gm15227-201ENSMUST00000121844 399 ntBASIC5.37□□□□□ -1.55
NcanP55066 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.37□□□□□ -1.55
NcanP55066 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NcanP55066 Gm5777-201ENSMUST00000177265 448 ntBASIC5.37□□□□□ -1.55
NcanP55066 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NcanP55066 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NcanP55066 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NcanP55066 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
NcanP55066 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NcanP55066 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NcanP55066 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
NcanP55066 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NcanP55066 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.37□□□□□ -1.55
NcanP55066 Gm43037-201ENSMUST00000196808 250 ntBASIC5.37□□□□□ -1.55
NcanP55066 Gm42824-201ENSMUST00000199361 247 ntBASIC5.37□□□□□ -1.55
NcanP55066 Gm19617-201ENSMUST00000202977 308 ntBASIC5.37□□□□□ -1.55
NcanP55066 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.37□□□□□ -1.55
NcanP55066 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC5.37□□□□□ -1.55
NcanP55066 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NcanP55066 Gm3213-201ENSMUST00000219296 441 ntBASIC5.37□□□□□ -1.55
NcanP55066 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC5.37□□□□□ -1.55
NcanP55066 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.37□□□□□ -1.55
NcanP55066 CT025552.2-201ENSMUST00000225497 317 ntBASIC5.37□□□□□ -1.55
NcanP55066 AC154527.3-201ENSMUST00000225519 989 ntBASIC5.37□□□□□ -1.55
NcanP55066 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.37□□□□□ -1.55
NcanP55066 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
NcanP55066 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
NcanP55066 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
NcanP55066 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NcanP55066 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NcanP55066 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
NcanP55066 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.37□□□□□ -1.55
NcanP55066 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.37□□□□□ -1.55
NcanP55066 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms