Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdx2P43241 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdx2P43241 Gm20342-201ENSMUST00000185480 9720 ntBASIC4.66□□□□□ -1.66
Cdx2P43241 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Cdx2P43241 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Cdx2P43241 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.66□□□□□ -1.66
Cdx2P43241 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Cdx2P43241 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Cdx2P43241 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
Cdx2P43241 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdx2P43241 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Cdx2P43241 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.65□□□□□ -1.66
Cdx2P43241 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Cdx2P43241 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
Cdx2P43241 Gm45644-201ENSMUST00000210255 2740 ntBASIC4.65□□□□□ -1.66
Cdx2P43241 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC4.65□□□□□ -1.66
Cdx2P43241 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Cdx2P43241 Gm11914-201ENSMUST00000117094 507 ntBASIC4.65□□□□□ -1.67
Cdx2P43241 Gm13250-201ENSMUST00000117209 753 ntBASIC4.65□□□□□ -1.67
Cdx2P43241 Gm14909-201ENSMUST00000117853 351 ntBASIC4.65□□□□□ -1.67
Cdx2P43241 Gm15493-201ENSMUST00000119461 528 ntBASIC4.65□□□□□ -1.67
Cdx2P43241 Gm16463-201ENSMUST00000120527 721 ntBASIC4.65□□□□□ -1.67
Cdx2P43241 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Cdx2P43241 Gm13867-201ENSMUST00000120844 395 ntBASIC4.65□□□□□ -1.67
Cdx2P43241 Gm13932-201ENSMUST00000120873 610 ntBASIC4.65□□□□□ -1.67
Cdx2P43241 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Cdx2P43241 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Cdx2P43241 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Cdx2P43241 Gm25923-201ENSMUST00000158312 138 ntBASIC4.65□□□□□ -1.67
Cdx2P43241 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC4.65□□□□□ -1.67
Cdx2P43241 Gm21816-201ENSMUST00000179255 360 ntBASIC4.65□□□□□ -1.67
Cdx2P43241 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Cdx2P43241 Gm24949-201ENSMUST00000183609 215 ntBASIC4.65□□□□□ -1.67
Cdx2P43241 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
Cdx2P43241 Gm38011-201ENSMUST00000193312 279 ntBASIC4.65□□□□□ -1.67
Cdx2P43241 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Cdx2P43241 Gm45007-201ENSMUST00000206237 366 ntBASIC4.65□□□□□ -1.67
Cdx2P43241 Gm44816-201ENSMUST00000206666 477 ntBASIC4.65□□□□□ -1.67
Cdx2P43241 Gm33626-201ENSMUST00000206790 828 ntBASIC4.65□□□□□ -1.67
Cdx2P43241 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Cdx2P43241 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.65□□□□□ -1.67
Cdx2P43241 Gm2059-201ENSMUST00000212025 287 ntBASIC4.65□□□□□ -1.67
Cdx2P43241 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC4.65□□□□□ -1.67
Cdx2P43241 AC132112.1-201ENSMUST00000226354 505 ntBASIC4.65□□□□□ -1.67
Cdx2P43241 AC146601.1-201ENSMUST00000227910 905 ntBASIC4.65□□□□□ -1.67
Cdx2P43241 Snora30-201ENSMUST00000083325 130 ntBASIC4.65□□□□□ -1.67
Cdx2P43241 Gm24031-201ENSMUST00000083930 131 ntBASIC4.65□□□□□ -1.67
Cdx2P43241 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Cdx2P43241 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
Cdx2P43241 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Cdx2P43241 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Cdx2P43241 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.65□□□□□ -1.67
Cdx2P43241 Gm43526-201ENSMUST00000196666 1565 ntBASIC4.65□□□□□ -1.67
Cdx2P43241 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC4.65□□□□□ -1.67
Cdx2P43241 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC4.65□□□□□ -1.67
Cdx2P43241 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Cdx2P43241 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx2P43241 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx2P43241 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Cdx2P43241 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx2P43241 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx2P43241 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx2P43241 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx2P43241 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Cdx2P43241 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx2P43241 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Cdx2P43241 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.64□□□□□ -1.67
Cdx2P43241 Gm12231-201ENSMUST00000119447 695 ntBASIC4.64□□□□□ -1.67
Cdx2P43241 Gm14881-201ENSMUST00000120366 372 ntBASIC4.64□□□□□ -1.67
Cdx2P43241 Gm14732-201ENSMUST00000121372 545 ntBASIC4.64□□□□□ -1.67
Cdx2P43241 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx2P43241 Gm23465-201ENSMUST00000157134 262 ntBASIC4.64□□□□□ -1.67
Cdx2P43241 Gm3084-201ENSMUST00000169967 598 ntBASIC4.64□□□□□ -1.67
Cdx2P43241 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Cdx2P43241 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx2P43241 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.64□□□□□ -1.67
Cdx2P43241 Gm29196-201ENSMUST00000189239 618 ntBASIC4.64□□□□□ -1.67
Cdx2P43241 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx2P43241 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC4.64□□□□□ -1.67
Cdx2P43241 Gm29138-201ENSMUST00000191444 348 ntBASIC4.64□□□□□ -1.67
Cdx2P43241 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx2P43241 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.64□□□□□ -1.67
Cdx2P43241 Gm43144-201ENSMUST00000198256 485 ntBASIC4.64□□□□□ -1.67
Cdx2P43241 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Cdx2P43241 AC156576.2-202ENSMUST00000222525 411 ntBASIC4.64□□□□□ -1.67
Cdx2P43241 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx2P43241 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx2P43241 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Cdx2P43241 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.64□□□□□ -1.67
Cdx2P43241 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
Cdx2P43241 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx2P43241 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC4.64□□□□□ -1.67
Cdx2P43241 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx2P43241 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC4.64□□□□□ -1.67
Cdx2P43241 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx2P43241 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC4.64□□□□□ -1.67
Cdx2P43241 Gm43283-201ENSMUST00000199138 2548 ntBASIC4.64□□□□□ -1.67
Cdx2P43241 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Cdx2P43241 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx2P43241 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms