Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Traf1P39428 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Traf1P39428 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Traf1P39428 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Traf1P39428 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Traf1P39428 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC5.89□□□□□ -1.47
Traf1P39428 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Traf1P39428 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Traf1P39428 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Traf1P39428 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Traf1P39428 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.89□□□□□ -1.47
Traf1P39428 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Traf1P39428 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Traf1P39428 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Traf1P39428 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC5.89□□□□□ -1.47
Traf1P39428 Gm11781-201ENSMUST00000118328 472 ntBASIC5.89□□□□□ -1.47
Traf1P39428 Gm14655-201ENSMUST00000120124 578 ntBASIC5.89□□□□□ -1.47
Traf1P39428 Gm13487-201ENSMUST00000122240 864 ntBASIC5.89□□□□□ -1.47
Traf1P39428 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Traf1P39428 Gm26312-201ENSMUST00000157769 165 ntBASIC5.89□□□□□ -1.47
Traf1P39428 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Traf1P39428 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Traf1P39428 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.89□□□□□ -1.47
Traf1P39428 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC5.89□□□□□ -1.47
Traf1P39428 Gm9443-201ENSMUST00000188406 816 ntBASIC5.89□□□□□ -1.47
Traf1P39428 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC5.89□□□□□ -1.47
Traf1P39428 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC5.89□□□□□ -1.47
Traf1P39428 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Traf1P39428 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.89□□□□□ -1.47
Traf1P39428 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC5.89□□□□□ -1.47
Traf1P39428 Gm2645-201ENSMUST00000223516 547 ntBASIC5.89□□□□□ -1.47
Traf1P39428 AC151902.1-201ENSMUST00000227800 375 ntBASIC5.89□□□□□ -1.47
Traf1P39428 Gm23796-201ENSMUST00000084011 160 ntBASIC5.89□□□□□ -1.47
Traf1P39428 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC5.89□□□□□ -1.47
Traf1P39428 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Traf1P39428 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Traf1P39428 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Traf1P39428 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Traf1P39428 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Traf1P39428 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Traf1P39428 AC170999.1-201ENSMUST00000226359 1585 ntBASIC5.89□□□□□ -1.47
Traf1P39428 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Traf1P39428 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Traf1P39428 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
Traf1P39428 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Traf1P39428 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Traf1P39428 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Traf1P39428 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Traf1P39428 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Traf1P39428 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Traf1P39428 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Traf1P39428 Gm13755-201ENSMUST00000118509 305 ntBASIC5.88□□□□□ -1.47
Traf1P39428 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.88□□□□□ -1.47
Traf1P39428 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC5.88□□□□□ -1.47
Traf1P39428 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC5.88□□□□□ -1.47
Traf1P39428 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.88□□□□□ -1.47
Traf1P39428 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.88□□□□□ -1.47
Traf1P39428 Gm24175-201ENSMUST00000158931 129 ntBASIC5.88□□□□□ -1.47
Traf1P39428 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC5.88□□□□□ -1.47
Traf1P39428 Gm17152-201ENSMUST00000172430 535 ntBASIC5.88□□□□□ -1.47
Traf1P39428 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.88□□□□□ -1.47
Traf1P39428 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC5.88□□□□□ -1.47
Traf1P39428 Gm22857-201ENSMUST00000174969 134 ntBASIC5.88□□□□□ -1.47
Traf1P39428 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC5.88□□□□□ -1.47
Traf1P39428 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC5.88□□□□□ -1.47
Traf1P39428 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC5.88□□□□□ -1.47
Traf1P39428 Gm43315-201ENSMUST00000198120 313 ntBASIC5.88□□□□□ -1.47
Traf1P39428 Gm19617-201ENSMUST00000202977 308 ntBASIC5.88□□□□□ -1.47
Traf1P39428 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC5.88□□□□□ -1.47
Traf1P39428 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC5.88□□□□□ -1.47
Traf1P39428 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC5.88□□□□□ -1.47
Traf1P39428 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.88□□□□□ -1.47
Traf1P39428 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC5.88□□□□□ -1.47
Traf1P39428 AC117237.1-201ENSMUST00000224035 395 ntBASIC5.88□□□□□ -1.47
Traf1P39428 Gm7117-201ENSMUST00000071515 387 ntBASIC5.88□□□□□ -1.47
Traf1P39428 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Traf1P39428 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Traf1P39428 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Traf1P39428 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Traf1P39428 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.88□□□□□ -1.47
Traf1P39428 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Traf1P39428 AC151904.4-201ENSMUST00000219868 1319 ntBASIC5.88□□□□□ -1.47
Traf1P39428 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
Traf1P39428 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.88□□□□□ -1.47
Traf1P39428 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Traf1P39428 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC5.88□□□□□ -1.47
Traf1P39428 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Traf1P39428 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.88□□□□□ -1.47
Traf1P39428 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
Traf1P39428 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Traf1P39428 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Traf1P39428 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.88□□□□□ -1.47
Traf1P39428 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC5.88□□□□□ -1.47
Traf1P39428 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC5.88□□□□□ -1.47
Traf1P39428 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.88□□□□□ -1.47
Traf1P39428 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.88□□□□□ -1.47
Traf1P39428 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Traf1P39428 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Traf1P39428 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.87□□□□□ -1.47
Traf1P39428 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms