Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm17132-201ENSMUST00000109542 1158 ntBASIC6.99□□□□□ -1.29
Col18a1P39061 Gm25557-201ENSMUST00000158084 315 ntBASIC6.99□□□□□ -1.29
Col18a1P39061 Gm17046-201ENSMUST00000168078 850 ntBASIC6.99□□□□□ -1.29
Col18a1P39061 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col18a1P39061 Gm20811-201ENSMUST00000190500 553 ntBASIC6.99□□□□□ -1.29
Col18a1P39061 Gm38329-201ENSMUST00000193473 427 ntBASIC6.99□□□□□ -1.29
Col18a1P39061 Mir6516-201ENSMUST00000196236 110 ntBASIC6.99□□□□□ -1.29
Col18a1P39061 AL645522.1-201ENSMUST00000197692 104 ntBASIC6.99□□□□□ -1.29
Col18a1P39061 Gm44654-201ENSMUST00000208052 329 ntBASIC6.99□□□□□ -1.29
Col18a1P39061 Gm44869-201ENSMUST00000208836 357 ntBASIC6.99□□□□□ -1.29
Col18a1P39061 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Col18a1P39061 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col18a1P39061 CT025603.4-201ENSMUST00000225777 413 ntBASIC6.99□□□□□ -1.29
Col18a1P39061 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col18a1P39061 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Col18a1P39061 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Col18a1P39061 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Col18a1P39061 Gm42598-201ENSMUST00000200110 2437 ntBASIC6.99□□□□□ -1.29
Col18a1P39061 Gm42496-201ENSMUST00000197976 3241 ntBASIC6.99□□□□□ -1.29
Col18a1P39061 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Col18a1P39061 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col18a1P39061 Gm38104-201ENSMUST00000195121 1895 ntBASIC6.98□□□□□ -1.29
Col18a1P39061 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col18a1P39061 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Col18a1P39061 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col18a1P39061 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Col18a1P39061 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
Col18a1P39061 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC6.98□□□□□ -1.29
Col18a1P39061 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Col18a1P39061 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Col18a1P39061 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Col18a1P39061 Gm12427-201ENSMUST00000117719 302 ntBASIC6.98□□□□□ -1.29
Col18a1P39061 Gm12994-201ENSMUST00000119601 447 ntBASIC6.98□□□□□ -1.29
Col18a1P39061 Gm15390-201ENSMUST00000120323 738 ntBASIC6.98□□□□□ -1.29
Col18a1P39061 Gm12288-201ENSMUST00000121054 1282 ntBASIC6.98□□□□□ -1.29
Col18a1P39061 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Col18a1P39061 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC6.98□□□□□ -1.29
Col18a1P39061 Gm3123-201ENSMUST00000163480 480 ntBASIC6.98□□□□□ -1.29
Col18a1P39061 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
Col18a1P39061 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC6.98□□□□□ -1.29
Col18a1P39061 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC6.98□□□□□ -1.29
Col18a1P39061 Gm17911-201ENSMUST00000210806 877 ntBASIC6.98□□□□□ -1.29
Col18a1P39061 AC153957.1-201ENSMUST00000215235 229 ntBASIC6.98□□□□□ -1.29
Col18a1P39061 AC105169.1-201ENSMUST00000218912 1294 ntBASIC6.98□□□□□ -1.29
Col18a1P39061 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Col18a1P39061 CT025552.2-201ENSMUST00000225497 317 ntBASIC6.98□□□□□ -1.29
Col18a1P39061 AC134860.6-201ENSMUST00000226038 285 ntBASIC6.98□□□□□ -1.29
Col18a1P39061 CT025548.1-201ENSMUST00000227459 257 ntBASIC6.98□□□□□ -1.29
Col18a1P39061 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col18a1P39061 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Col18a1P39061 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Col18a1P39061 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Col18a1P39061 Gm23102-201ENSMUST00000083724 116 ntBASIC6.98□□□□□ -1.29
Col18a1P39061 Ncbp3-201ENSMUST00000021135 12106 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col18a1P39061 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col18a1P39061 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC6.98□□□□□ -1.29
Col18a1P39061 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Col18a1P39061 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC6.98□□□□□ -1.29
Col18a1P39061 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col18a1P39061 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Col18a1P39061 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Col18a1P39061 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Col18a1P39061 Fam210a-201ENSMUST00000042852 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col18a1P39061 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
Col18a1P39061 CT025535.2-201ENSMUST00000228572 7441 ntBASIC6.98□□□□□ -1.29
Col18a1P39061 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
Col18a1P39061 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col18a1P39061 Gm5942-201ENSMUST00000120046 439 ntBASIC6.97□□□□□ -1.29
Col18a1P39061 Gm5963-201ENSMUST00000143451 236 ntBASIC6.97□□□□□ -1.29
Col18a1P39061 Gm25413-201ENSMUST00000158544 312 ntBASIC6.97□□□□□ -1.29
Col18a1P39061 Gm3339-201ENSMUST00000163462 475 ntBASIC6.97□□□□□ -1.29
Col18a1P39061 Gm6673-201ENSMUST00000166114 700 ntBASIC6.97□□□□□ -1.29
Col18a1P39061 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Col18a1P39061 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC6.97□□□□□ -1.29
Col18a1P39061 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col18a1P39061 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Col18a1P39061 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC6.97□□□□□ -1.29
Col18a1P39061 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC6.97□□□□□ -1.29
Col18a1P39061 Gm3912-203ENSMUST00000211024 367 ntBASIC6.97□□□□□ -1.29
Col18a1P39061 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC6.97□□□□□ -1.29
Col18a1P39061 AC118733.1-201ENSMUST00000217387 1217 ntBASIC6.97□□□□□ -1.29
Col18a1P39061 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC6.97□□□□□ -1.29
Col18a1P39061 AC139294.2-201ENSMUST00000227159 285 ntBASIC6.97□□□□□ -1.29
Col18a1P39061 AC156574.2-201ENSMUST00000228023 282 ntBASIC6.97□□□□□ -1.29
Col18a1P39061 AC130547.1-201ENSMUST00000228079 1047 ntBASIC6.97□□□□□ -1.29
Col18a1P39061 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col18a1P39061 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Col18a1P39061 Gm37593-201ENSMUST00000191669 3254 ntBASIC6.97□□□□□ -1.29
Col18a1P39061 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6.97□□□□□ -1.29
Col18a1P39061 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Col18a1P39061 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Col18a1P39061 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col18a1P39061 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC6.97□□□□□ -1.29
Col18a1P39061 Gm43488-201ENSMUST00000198874 2504 ntBASIC6.97□□□□□ -1.29
Col18a1P39061 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col18a1P39061 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col18a1P39061 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC6.97□□□□□ -1.29
Col18a1P39061 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col18a1P39061 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Col18a1P39061 Gm24835-201ENSMUST00000116777 111 ntBASIC6.97□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms