Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Ear-ps5-201ENSMUST00000164700 463 ntBASIC4.17□□□□□ -1.74
Cdx1P18111 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC4.17□□□□□ -1.74
Cdx1P18111 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC4.17□□□□□ -1.74
Cdx1P18111 Gm27036-201ENSMUST00000182465 980 ntBASIC4.17□□□□□ -1.74
Cdx1P18111 Dlx6os1-204ENSMUST00000184182 146 ntBASIC4.17□□□□□ -1.74
Cdx1P18111 Gm27148-201ENSMUST00000185086 160 ntBASIC4.17□□□□□ -1.74
Cdx1P18111 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cdx1P18111 Gm29454-201ENSMUST00000190805 393 ntBASIC4.17□□□□□ -1.74
Cdx1P18111 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC4.17□□□□□ -1.74
Cdx1P18111 Gm17953-201ENSMUST00000192061 667 ntBASIC4.17□□□□□ -1.74
Cdx1P18111 Gm42539-201ENSMUST00000197009 308 ntBASIC4.17□□□□□ -1.74
Cdx1P18111 Gm38670-201ENSMUST00000199248 77 ntBASIC4.17□□□□□ -1.74
Cdx1P18111 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cdx1P18111 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC4.17□□□□□ -1.74
Cdx1P18111 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC4.17□□□□□ -1.74
Cdx1P18111 Gm3690-201ENSMUST00000211341 262 ntBASIC4.17□□□□□ -1.74
Cdx1P18111 AC142273.1-201ENSMUST00000213723 673 ntBASIC4.17□□□□□ -1.74
Cdx1P18111 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC4.17□□□□□ -1.74
Cdx1P18111 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC4.17□□□□□ -1.74
Cdx1P18111 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC4.17□□□□□ -1.74
Cdx1P18111 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.17□□□□□ -1.74
Cdx1P18111 Gm6474-201ENSMUST00000223250 699 ntBASIC4.17□□□□□ -1.74
Cdx1P18111 AC117797.1-201ENSMUST00000223977 695 ntBASIC4.17□□□□□ -1.74
Cdx1P18111 AC131117.2-203ENSMUST00000225886 950 ntBASIC4.17□□□□□ -1.74
Cdx1P18111 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.17□□□□□ -1.74
Cdx1P18111 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Cdx1P18111 Gm24525-201ENSMUST00000082917 151 ntBASIC4.17□□□□□ -1.74
Cdx1P18111 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Cdx1P18111 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cdx1P18111 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cdx1P18111 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Cdx1P18111 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Cdx1P18111 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Cdx1P18111 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Cdx1P18111 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Cdx1P18111 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Cdx1P18111 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Cdx1P18111 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Cdx1P18111 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Cdx1P18111 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Cdx1P18111 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.16□□□□□ -1.74
Cdx1P18111 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Cdx1P18111 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Cdx1P18111 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Cdx1P18111 Gm37181-201ENSMUST00000192513 1727 ntBASIC4.16□□□□□ -1.74
Cdx1P18111 Gm13590-201ENSMUST00000120183 1588 ntBASIC4.16□□□□□ -1.74
Cdx1P18111 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.16□□□□□ -1.74
Cdx1P18111 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Cdx1P18111 Gm42661-201ENSMUST00000202364 1442 ntBASIC4.16□□□□□ -1.74
Cdx1P18111 Gm42561-201ENSMUST00000202563 1442 ntBASIC4.16□□□□□ -1.74
Cdx1P18111 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
Cdx1P18111 Gm13579-201ENSMUST00000118519 517 ntBASIC4.16□□□□□ -1.74
Cdx1P18111 Gm4989-201ENSMUST00000118711 749 ntBASIC4.16□□□□□ -1.74
Cdx1P18111 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.16□□□□□ -1.74
Cdx1P18111 Gm11894-201ENSMUST00000121579 328 ntBASIC4.16□□□□□ -1.74
Cdx1P18111 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC4.16□□□□□ -1.74
Cdx1P18111 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.16□□□□□ -1.74
Cdx1P18111 Gm20397-201ENSMUST00000174520 362 ntBASIC4.16□□□□□ -1.74
Cdx1P18111 Gm22122-201ENSMUST00000175147 200 ntBASIC4.16□□□□□ -1.74
Cdx1P18111 Gm24407-201ENSMUST00000177864 141 ntBASIC4.16□□□□□ -1.74
Cdx1P18111 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC4.16□□□□□ -1.74
Cdx1P18111 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Cdx1P18111 Mir7006-201ENSMUST00000183624 69 ntBASIC4.16□□□□□ -1.74
Cdx1P18111 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC4.16□□□□□ -1.74
Cdx1P18111 Gm28724-202ENSMUST00000194218 295 ntBASIC4.16□□□□□ -1.74
Cdx1P18111 Gm43304-201ENSMUST00000196803 326 ntBASIC4.16□□□□□ -1.74
Cdx1P18111 Gm42437-201ENSMUST00000197263 923 ntBASIC4.16□□□□□ -1.74
Cdx1P18111 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC4.16□□□□□ -1.74
Cdx1P18111 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC4.16□□□□□ -1.74
Cdx1P18111 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC4.16□□□□□ -1.74
Cdx1P18111 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Cdx1P18111 AC153840.1-201ENSMUST00000219685 313 ntBASIC4.16□□□□□ -1.74
Cdx1P18111 AC161884.2-201ENSMUST00000224513 227 ntBASIC4.16□□□□□ -1.74
Cdx1P18111 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Cdx1P18111 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Cdx1P18111 n-R5s46-201ENSMUST00000083960 116 ntBASIC4.16□□□□□ -1.74
Cdx1P18111 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Cdx1P18111 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
Cdx1P18111 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Cdx1P18111 Gm38189-201ENSMUST00000194495 1457 ntBASIC4.16□□□□□ -1.74
Cdx1P18111 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Cdx1P18111 Gm38451-201ENSMUST00000208329 2646 ntBASIC4.16□□□□□ -1.74
Cdx1P18111 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Cdx1P18111 Gm8980-201ENSMUST00000140232 2197 ntBASIC4.16□□□□□ -1.74
Cdx1P18111 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
Cdx1P18111 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Cdx1P18111 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Cdx1P18111 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
Cdx1P18111 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
Cdx1P18111 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Cdx1P18111 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.15□□□□□ -1.74
Cdx1P18111 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Cdx1P18111 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
Cdx1P18111 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
Cdx1P18111 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Cdx1P18111 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Cdx1P18111 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Cdx1P18111 Gm13195-201ENSMUST00000117229 261 ntBASIC4.15□□□□□ -1.75
Cdx1P18111 Gm13537-201ENSMUST00000120467 267 ntBASIC4.15□□□□□ -1.75
Cdx1P18111 Gm15044-201ENSMUST00000120703 598 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms