Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm20997-201ENSMUST00000205148 231 ntBASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Chmp6P0C0A3 AC126554.4-201ENSMUST00000221055 409 ntBASIC5.27□□□□□ -1.57
Chmp6P0C0A3 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5.27□□□□□ -1.57
Chmp6P0C0A3 CT009600.2-201ENSMUST00000226638 481 ntBASIC5.27□□□□□ -1.57
Chmp6P0C0A3 CT025548.1-201ENSMUST00000227459 257 ntBASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Gm10145-201ENSMUST00000077776 462 ntBASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Chmp6P0C0A3 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Gm44433-201ENSMUST00000203540 4832 ntBASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Gm43921-201ENSMUST00000204296 1792 ntBASIC5.27□□□□□ -1.57
Chmp6P0C0A3 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Chmp6P0C0A3 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Gm11971-201ENSMUST00000117715 288 ntBASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Gm15670-201ENSMUST00000117740 447 ntBASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Gm8145-201ENSMUST00000118220 745 ntBASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Gm11822-201ENSMUST00000119177 415 ntBASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Gm12685-201ENSMUST00000121702 214 ntBASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Gm24402-201ENSMUST00000157873 91 ntBASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Gm24944-201ENSMUST00000158330 128 ntBASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Gm8214-201ENSMUST00000172123 351 ntBASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Gm8282-201ENSMUST00000187559 483 ntBASIC5.26□□□□□ -1.57
Chmp6P0C0A3 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Chmp6P0C0A3 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Gm20056-201ENSMUST00000194813 519 ntBASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Gm18330-201ENSMUST00000199246 547 ntBASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Gm43968-201ENSMUST00000203388 389 ntBASIC5.26□□□□□ -1.57
Chmp6P0C0A3 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.26□□□□□ -1.57
Chmp6P0C0A3 AC124356.2-201ENSMUST00000221874 336 ntBASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Gm7822-201ENSMUST00000222433 581 ntBASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Chmp6P0C0A3 CT030662.2-201ENSMUST00000226942 805 ntBASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Olfr1153-201ENSMUST00000052300 957 ntBASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Gm28240-201ENSMUST00000187560 2053 ntBASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.26□□□□□ -1.57
Chmp6P0C0A3 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Chmp6P0C0A3 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.25□□□□□ -1.57
Chmp6P0C0A3 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Chmp6P0C0A3 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Chmp6P0C0A3 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.25□□□□□ -1.57
Chmp6P0C0A3 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Chmp6P0C0A3 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Chmp6P0C0A3 Gm25096-201ENSMUST00000104043 129 ntBASIC5.25□□□□□ -1.57
Chmp6P0C0A3 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.25□□□□□ -1.57
Chmp6P0C0A3 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Chmp6P0C0A3 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.25□□□□□ -1.57
Chmp6P0C0A3 Gm22870-201ENSMUST00000157501 112 ntBASIC5.25□□□□□ -1.57
Chmp6P0C0A3 Gm17086-201ENSMUST00000171346 484 ntBASIC5.25□□□□□ -1.57
Chmp6P0C0A3 Gm26731-201ENSMUST00000180683 543 ntBASIC5.25□□□□□ -1.57
Chmp6P0C0A3 Gm21139-201ENSMUST00000186594 877 ntBASIC5.25□□□□□ -1.57
Chmp6P0C0A3 Gm21617-201ENSMUST00000188297 691 ntBASIC5.25□□□□□ -1.57
Chmp6P0C0A3 Gm37884-201ENSMUST00000191857 818 ntBASIC5.25□□□□□ -1.57
Chmp6P0C0A3 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.25□□□□□ -1.57
Chmp6P0C0A3 Gm17775-201ENSMUST00000198542 258 ntBASIC5.25□□□□□ -1.57
Chmp6P0C0A3 Gm43919-201ENSMUST00000204303 364 ntBASIC5.25□□□□□ -1.57
Chmp6P0C0A3 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Chmp6P0C0A3 AC131743.1-201ENSMUST00000222138 4024 ntBASIC5.25□□□□□ -1.57
Chmp6P0C0A3 Dbpht2-202ENSMUST00000221311 5341 ntBASIC5.25□□□□□ -1.57
Chmp6P0C0A3 AC122408.2-201ENSMUST00000217901 1391 ntBASIC5.25□□□□□ -1.57
Chmp6P0C0A3 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Chmp6P0C0A3 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Chmp6P0C0A3 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Chmp6P0C0A3 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Chmp6P0C0A3 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Chmp6P0C0A3 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Chmp6P0C0A3 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.24□□□□□ -1.57
Chmp6P0C0A3 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Chmp6P0C0A3 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Chmp6P0C0A3 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Chmp6P0C0A3 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Chmp6P0C0A3 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC5.24□□□□□ -1.57
Chmp6P0C0A3 Gm15189-201ENSMUST00000121164 1966 ntBASIC5.24□□□□□ -1.57
Chmp6P0C0A3 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 116.1 ms