Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm37248-201ENSMUST00000193576 3174 ntBASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Gm23271-201ENSMUST00000104052 124 ntBASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Gm11393-201ENSMUST00000118019 288 ntBASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Gm15916-201ENSMUST00000118355 736 ntBASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Gm12094-201ENSMUST00000121781 472 ntBASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Gm19637-201ENSMUST00000185933 579 ntBASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Clasp1-214ENSMUST00000189570 5502 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Gm18757-201ENSMUST00000207938 3141 ntBASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Mroh2a-202ENSMUST00000113130 7491 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Gm12322-201ENSMUST00000121605 389 ntBASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Gm23837-201ENSMUST00000122656 286 ntBASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Gm23365-201ENSMUST00000175019 125 ntBASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Gm25960-201ENSMUST00000175110 125 ntBASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Gm44453-201ENSMUST00000175161 126 ntBASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Gm25195-201ENSMUST00000177656 126 ntBASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Gm23945-201ENSMUST00000179609 92 ntBASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Gm8785-201ENSMUST00000220259 487 ntBASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Ep400-203ENSMUST00000112435 10420 ntTSL 5 BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Gm28359-201ENSMUST00000187470 1322 ntBASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Nup210l-201ENSMUST00000029548 5681 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Tfcp2l1-201ENSMUST00000027629 9269 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Gm37243-201ENSMUST00000193407 595 ntBASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Gm38098-201ENSMUST00000194115 241 ntBASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Gm36943-201ENSMUST00000194422 282 ntBASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Pcdh15-231ENSMUST00000177107 5696 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Olfr750-202ENSMUST00000216202 5789 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Zfp407-202ENSMUST00000125763 7906 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Med12-204ENSMUST00000117706 6940 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Gm14890-201ENSMUST00000117660 676 ntBASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Gm19219-201ENSMUST00000215863 724 ntBASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Daam1-205ENSMUST00000223272 5835 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Gm37762-201ENSMUST00000194515 3561 ntBASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Kdm5a-201ENSMUST00000005108 10944 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 AC164102.1-201ENSMUST00000220524 1553 ntBASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Gm42776-201ENSMUST00000198031 406 ntBASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 St3gal1-201ENSMUST00000092640 4985 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
Col6a3E9PWQ3 Gm37304-201ENSMUST00000193833 2886 ntBASIC4.59□□□□□ -1.67
Col6a3E9PWQ3 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Col6a3E9PWQ3 Pogz-204ENSMUST00000107269 5966 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Col6a3E9PWQ3 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC4.59□□□□□ -1.67
Col6a3E9PWQ3 Gm43710-201ENSMUST00000199583 452 ntBASIC4.59□□□□□ -1.67
Col6a3E9PWQ3 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Col6a3E9PWQ3 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Col6a3E9PWQ3 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms