Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Gm12001-201ENSMUST00000121727 913 ntBASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Gm22959-201ENSMUST00000122514 303 ntBASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Gm6472-201ENSMUST00000178147 651 ntBASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Gm16531-201ENSMUST00000180658 967 ntBASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Gm27528-201ENSMUST00000183544 205 ntBASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Gm37932-201ENSMUST00000192258 1167 ntBASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Gm45700-201ENSMUST00000205866 347 ntBASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Gm18039-201ENSMUST00000217816 728 ntBASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 AC110381.1-201ENSMUST00000218987 586 ntBASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 AC164424.1-201ENSMUST00000221690 170 ntBASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Platr25-208ENSMUST00000222602 939 ntBASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 AL589742.1-201ENSMUST00000226034 349 ntBASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Gm25260-201ENSMUST00000083053 134 ntBASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Gm7205-201ENSMUST00000196032 1323 ntBASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Rnf4Q9QZS2 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Ear-ps2-201ENSMUST00000100689 466 ntBASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Mir193b-201ENSMUST00000103784 79 ntBASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Gm13491-201ENSMUST00000118267 235 ntBASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Gm15044-201ENSMUST00000120703 598 ntBASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Gm23408-201ENSMUST00000158523 265 ntBASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Gm3091-201ENSMUST00000163408 484 ntBASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Gm27636-201ENSMUST00000184528 122 ntBASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Gm28389-201ENSMUST00000190090 697 ntBASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Gm37934-201ENSMUST00000192902 402 ntBASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Gm4321-201ENSMUST00000200520 442 ntBASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Gm44038-201ENSMUST00000203952 889 ntBASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Gm4587-201ENSMUST00000209135 637 ntBASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Gm10709-201ENSMUST00000213318 480 ntBASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Gm2645-201ENSMUST00000223516 547 ntBASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 AC140209.1-201ENSMUST00000227875 284 ntBASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Gm25739-201ENSMUST00000082886 107 ntBASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Gm24917-201ENSMUST00000083935 104 ntBASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Gm7676-201ENSMUST00000084055 319 ntBASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Gm42841-201ENSMUST00000199806 1932 ntBASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Rnf4Q9QZS2 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf4Q9QZS2 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Rnf4Q9QZS2 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf4Q9QZS2 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC5.1□□□□□ -1.59
Rnf4Q9QZS2 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms