Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm2987-201ENSMUST00000187673 1693 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm43843-201ENSMUST00000202396 1587 ntBASIC5.46□□□□□ -1.53
Clrn1Q8K445 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Clrn1Q8K445 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Clrn1Q8K445 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Clrn1Q8K445 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
Clrn1Q8K445 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Clrn1Q8K445 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Clrn1Q8K445 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.46□□□□□ -1.53
Clrn1Q8K445 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Clrn1Q8K445 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
Clrn1Q8K445 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Clrn1Q8K445 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm43577-201ENSMUST00000197090 3344 ntBASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.46□□□□□ -1.54
Clrn1Q8K445 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm24709-201ENSMUST00000104123 132 ntBASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm12433-201ENSMUST00000119659 255 ntBASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm11852-201ENSMUST00000120806 222 ntBASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm15379-201ENSMUST00000121224 648 ntBASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC5.46□□□□□ -1.54
Clrn1Q8K445 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm25439-201ENSMUST00000158280 131 ntBASIC5.46□□□□□ -1.54
Clrn1Q8K445 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm18354-201ENSMUST00000173515 1068 ntBASIC5.46□□□□□ -1.54
Clrn1Q8K445 Mirt2-201ENSMUST00000175179 285 ntBASIC5.46□□□□□ -1.54
Clrn1Q8K445 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm19560-201ENSMUST00000177510 514 ntBASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm18448-201ENSMUST00000186286 599 ntBASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm28996-201ENSMUST00000190316 721 ntBASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm18427-201ENSMUST00000195422 515 ntBASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC5.46□□□□□ -1.54
Clrn1Q8K445 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm42438-201ENSMUST00000197832 974 ntBASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm8930-201ENSMUST00000201693 768 ntBASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC5.46□□□□□ -1.54
Clrn1Q8K445 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC5.46□□□□□ -1.54
Clrn1Q8K445 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.46□□□□□ -1.54
Clrn1Q8K445 AC154257.2-201ENSMUST00000224166 340 ntBASIC5.46□□□□□ -1.54
Clrn1Q8K445 AC164116.1-201ENSMUST00000225810 622 ntBASIC5.46□□□□□ -1.54
Clrn1Q8K445 AC117202.1-201ENSMUST00000227007 445 ntBASIC5.46□□□□□ -1.54
Clrn1Q8K445 AC120375.2-202ENSMUST00000228722 397 ntBASIC5.46□□□□□ -1.54
Clrn1Q8K445 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Clrn1Q8K445 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Clrn1Q8K445 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Clrn1Q8K445 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Clrn1Q8K445 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Clrn1Q8K445 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm37685-201ENSMUST00000193507 2177 ntBASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm43330-201ENSMUST00000199706 2153 ntBASIC5.46□□□□□ -1.54
Clrn1Q8K445 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.46□□□□□ -1.54
Clrn1Q8K445 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC5.46□□□□□ -1.54
Clrn1Q8K445 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
Clrn1Q8K445 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.46□□□□□ -1.54
Clrn1Q8K445 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
Clrn1Q8K445 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Clrn1Q8K445 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Clrn1Q8K445 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm42508-201ENSMUST00000199972 3292 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Clrn1Q8K445 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 AC167013.5-201ENSMUST00000227597 2947 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm22591-201ENSMUST00000104243 106 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm11984-201ENSMUST00000118142 766 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm12102-201ENSMUST00000118251 604 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm12099-201ENSMUST00000118660 750 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm12448-201ENSMUST00000118852 655 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Clrn1Q8K445 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC5.45□□□□□ -1.54
Clrn1Q8K445 Gm13339-201ENSMUST00000120651 510 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms