Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Gm11822-201ENSMUST00000119177 415 ntBASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Gm15981-201ENSMUST00000119196 457 ntBASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Gm11742-201ENSMUST00000119903 233 ntBASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Gm12288-201ENSMUST00000121054 1282 ntBASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Gm12685-201ENSMUST00000121702 214 ntBASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Gm23673-201ENSMUST00000157474 298 ntBASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Gm25048-201ENSMUST00000158598 91 ntBASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Gm6647-201ENSMUST00000170514 641 ntBASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Gm27551-201ENSMUST00000184258 77 ntBASIC5.38□□□□□ -1.55
Herc4Q6PAV2 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Gm37243-201ENSMUST00000193407 595 ntBASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Herc4Q6PAV2 AC147615.1-201ENSMUST00000218914 441 ntBASIC5.38□□□□□ -1.55
Herc4Q6PAV2 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Gm10145-201ENSMUST00000077776 462 ntBASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Herc4Q6PAV2 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Gm11196-201ENSMUST00000119052 395 ntBASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Gm22226-201ENSMUST00000157355 109 ntBASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Gm28871-201ENSMUST00000186191 687 ntBASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Gm28097-201ENSMUST00000187333 366 ntBASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Gm43136-201ENSMUST00000200403 636 ntBASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Gm7588-201ENSMUST00000216866 571 ntBASIC5.37□□□□□ -1.55
Herc4Q6PAV2 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.37□□□□□ -1.55
Herc4Q6PAV2 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.37□□□□□ -1.55
Herc4Q6PAV2 AC125539.2-201ENSMUST00000228339 753 ntBASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Gm43319-201ENSMUST00000198036 2270 ntBASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Herc4Q6PAV2 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Herc4Q6PAV2 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Gm15012-201ENSMUST00000119176 106 ntBASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Gm13867-201ENSMUST00000120844 395 ntBASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Gm13132-201ENSMUST00000121194 472 ntBASIC5.36□□□□□ -1.55
Herc4Q6PAV2 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Gm43768-201ENSMUST00000198380 1258 ntBASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Gm19065-202ENSMUST00000203910 1165 ntBASIC5.36□□□□□ -1.55
Herc4Q6PAV2 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.36□□□□□ -1.55
Herc4Q6PAV2 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Snord15b-201ENSMUST00000083032 145 ntBASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Gm25818-201ENSMUST00000083282 164 ntBASIC5.36□□□□□ -1.55
Herc4Q6PAV2 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Herc4Q6PAV2 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Herc4Q6PAV2 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.36□□□□□ -1.55
Herc4Q6PAV2 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms