Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Olfr575-201ENSMUST00000084812 957 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Gm21286-201ENSMUST00000098035 545 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Mir804-201ENSMUST00000103251 95 ntBASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Gm5925-201ENSMUST00000105016 1497 ntBASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Gm15901-201ENSMUST00000117663 941 ntBASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Gm11805-201ENSMUST00000121238 600 ntBASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Gm25487-201ENSMUST00000158725 125 ntBASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Gm7713-201ENSMUST00000181201 1007 ntBASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Gm28665-201ENSMUST00000189269 670 ntBASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Gm45700-201ENSMUST00000205866 347 ntBASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 AC168056.3-201ENSMUST00000225395 2540 ntBASIC11.22□□□□□ -0.61
Trim41Q5NCC3 CT009480.1-201ENSMUST00000225771 4480 ntBASIC11.22□□□□□ -0.61
Trim41Q5NCC3 AC117588.2-201ENSMUST00000228340 311 ntBASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Gm7204-201ENSMUST00000062591 600 ntBASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trim41Q5NCC3 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Gm7133-201ENSMUST00000187797 2039 ntBASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trim41Q5NCC3 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim41Q5NCC3 AC158115.1-201ENSMUST00000222830 3182 ntBASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim41Q5NCC3 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Gm5949-201ENSMUST00000213468 1421 ntBASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Sec24c-202ENSMUST00000223751 4196 ntBASIC11.21□□□□□ -0.61
Trim41Q5NCC3 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Gm45112-201ENSMUST00000208576 5125 ntBASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Gm24550-201ENSMUST00000158648 279 ntBASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Gm18833-201ENSMUST00000173218 862 ntBASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Gm23164-201ENSMUST00000175084 111 ntBASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Gm20794-201ENSMUST00000177626 628 ntBASIC11.21□□□□□ -0.61
Trim41Q5NCC3 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trim41Q5NCC3 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Gm9480-201ENSMUST00000198038 616 ntBASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Gm43976-201ENSMUST00000203637 235 ntBASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Gm32453-201ENSMUST00000204183 456 ntBASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Gm44687-201ENSMUST00000204975 235 ntBASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Gm30694-201ENSMUST00000209278 1230 ntBASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trim41Q5NCC3 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim41Q5NCC3 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC11.21□□□□□ -0.62
Trim41Q5NCC3 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
Trim41Q5NCC3 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trim41Q5NCC3 Gm21036-201ENSMUST00000207544 2611 ntBASIC11.21□□□□□ -0.62
Trim41Q5NCC3 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Trim41Q5NCC3 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC11.2□□□□□ -0.62
Trim41Q5NCC3 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim41Q5NCC3 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim41Q5NCC3 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim41Q5NCC3 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms