Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Gm43843-201ENSMUST00000202396 1587 ntBASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Gm38020-201ENSMUST00000193066 4676 ntBASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 AC102431.1-201ENSMUST00000223773 1449 ntBASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Gm25096-201ENSMUST00000104043 129 ntBASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 n-R5s82-201ENSMUST00000104213 109 ntBASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Gm13321-201ENSMUST00000117101 400 ntBASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Gm13250-201ENSMUST00000117209 753 ntBASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Gm13440-201ENSMUST00000121665 496 ntBASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Gm24402-201ENSMUST00000157873 91 ntBASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Gm23046-201ENSMUST00000158369 284 ntBASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Mir6344-201ENSMUST00000183462 104 ntBASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Gm18800-202ENSMUST00000188688 1105 ntBASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Gm20239-201ENSMUST00000196610 982 ntBASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Gm43084-201ENSMUST00000200696 947 ntBASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Gm44402-201ENSMUST00000203677 238 ntBASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Gm44694-201ENSMUST00000205317 1298 ntBASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 AC127279.1-201ENSMUST00000220140 637 ntBASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Olfr192-201ENSMUST00000080251 925 ntBASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Gm23626-201ENSMUST00000082458 133 ntBASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 n-R5s205-201ENSMUST00000083149 125 ntBASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Mir17-201ENSMUST00000083574 84 ntBASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Upf3bQ3ULL6 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Upf3bQ3ULL6 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Upf3bQ3ULL6 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Upf3bQ3ULL6 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.58
Upf3bQ3ULL6 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Upf3bQ3ULL6 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Upf3bQ3ULL6 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.15□□□□□ -1.58
Upf3bQ3ULL6 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Gm24578-201ENSMUST00000103970 129 ntBASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Gm11971-201ENSMUST00000117715 288 ntBASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Gm15297-201ENSMUST00000117795 290 ntBASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Gm15012-201ENSMUST00000119176 106 ntBASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Gm25103-201ENSMUST00000122671 318 ntBASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Gm22870-201ENSMUST00000157501 112 ntBASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Gm25714-201ENSMUST00000158626 296 ntBASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Gm4134-201ENSMUST00000173244 563 ntBASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Gm20397-201ENSMUST00000174520 362 ntBASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Gm8614-201ENSMUST00000182528 978 ntBASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Gm43919-201ENSMUST00000204303 364 ntBASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Gm4574-201ENSMUST00000207804 542 ntBASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Gm19189-201ENSMUST00000221689 754 ntBASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Mir342-201ENSMUST00000083502 99 ntBASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Upf3bQ3ULL6 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Gm37814-201ENSMUST00000195820 3644 ntBASIC5.14□□□□□ -1.59
Upf3bQ3ULL6 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms