Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 AC124556.1-201ENSMUST00000218256 1319 ntBASIC4.34□□□□□ -1.71
H3f3aP84244 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
H3f3aP84244 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
H3f3aP84244 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
H3f3aP84244 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
H3f3aP84244 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
H3f3aP84244 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.34□□□□□ -1.72
H3f3aP84244 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.34□□□□□ -1.72
H3f3aP84244 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC4.34□□□□□ -1.72
H3f3aP84244 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
H3f3aP84244 Neat1-201ENSMUST00000173672 20771 ntBASIC4.34□□□□□ -1.72
H3f3aP84244 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
H3f3aP84244 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
H3f3aP84244 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
H3f3aP84244 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
H3f3aP84244 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
H3f3aP84244 Gm37558-201ENSMUST00000193684 2983 ntBASIC4.33□□□□□ -1.72
H3f3aP84244 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
H3f3aP84244 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
H3f3aP84244 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
H3f3aP84244 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
H3f3aP84244 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
H3f3aP84244 Gm43921-201ENSMUST00000204296 1792 ntBASIC4.33□□□□□ -1.72
H3f3aP84244 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
H3f3aP84244 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
H3f3aP84244 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
H3f3aP84244 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC4.33□□□□□ -1.72
H3f3aP84244 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
H3f3aP84244 Gm11971-201ENSMUST00000117715 288 ntBASIC4.33□□□□□ -1.72
H3f3aP84244 Gm8145-201ENSMUST00000118220 745 ntBASIC4.33□□□□□ -1.72
H3f3aP84244 Gm11759-201ENSMUST00000121742 464 ntBASIC4.33□□□□□ -1.72
H3f3aP84244 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
H3f3aP84244 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.33□□□□□ -1.72
H3f3aP84244 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC4.33□□□□□ -1.72
H3f3aP84244 Gm23327-201ENSMUST00000157420 78 ntBASIC4.33□□□□□ -1.72
H3f3aP84244 Gm6647-201ENSMUST00000170514 641 ntBASIC4.33□□□□□ -1.72
H3f3aP84244 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
H3f3aP84244 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC4.33□□□□□ -1.72
H3f3aP84244 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
H3f3aP84244 Gm18342-201ENSMUST00000186987 694 ntBASIC4.33□□□□□ -1.72
H3f3aP84244 Gm28097-201ENSMUST00000187333 366 ntBASIC4.33□□□□□ -1.72
H3f3aP84244 Gm2427-201ENSMUST00000189121 881 ntBASIC4.33□□□□□ -1.72
H3f3aP84244 Gm37614-201ENSMUST00000195645 210 ntBASIC4.33□□□□□ -1.72
H3f3aP84244 Gm17775-201ENSMUST00000198542 258 ntBASIC4.33□□□□□ -1.72
H3f3aP84244 Gm8891-201ENSMUST00000198546 832 ntBASIC4.33□□□□□ -1.72
H3f3aP84244 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC4.33□□□□□ -1.72
H3f3aP84244 Gm44261-201ENSMUST00000203337 209 ntBASIC4.33□□□□□ -1.72
H3f3aP84244 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC4.33□□□□□ -1.72
H3f3aP84244 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
H3f3aP84244 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.33□□□□□ -1.72
H3f3aP84244 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.33□□□□□ -1.72
H3f3aP84244 AC122034.1-201ENSMUST00000227641 595 ntBASIC4.33□□□□□ -1.72
H3f3aP84244 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.33□□□□□ -1.72
H3f3aP84244 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC4.33□□□□□ -1.72
H3f3aP84244 Gm24166-201ENSMUST00000082724 135 ntBASIC4.33□□□□□ -1.72
H3f3aP84244 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
H3f3aP84244 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.33□□□□□ -1.72
H3f3aP84244 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
H3f3aP84244 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
H3f3aP84244 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
H3f3aP84244 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
H3f3aP84244 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
H3f3aP84244 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC4.33□□□□□ -1.72
H3f3aP84244 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
H3f3aP84244 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
H3f3aP84244 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
H3f3aP84244 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
H3f3aP84244 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
H3f3aP84244 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
H3f3aP84244 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
H3f3aP84244 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
H3f3aP84244 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
H3f3aP84244 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
H3f3aP84244 n-R5s82-201ENSMUST00000104213 109 ntBASIC4.32□□□□□ -1.72
H3f3aP84244 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
H3f3aP84244 Gm12332-201ENSMUST00000121397 922 ntBASIC4.32□□□□□ -1.72
H3f3aP84244 Gm15057-201ENSMUST00000121516 534 ntBASIC4.32□□□□□ -1.72
H3f3aP84244 Gm23673-201ENSMUST00000157474 298 ntBASIC4.32□□□□□ -1.72
H3f3aP84244 Gm22530-201ENSMUST00000158820 118 ntBASIC4.32□□□□□ -1.72
H3f3aP84244 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
H3f3aP84244 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC4.32□□□□□ -1.72
H3f3aP84244 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
H3f3aP84244 Gm43015-201ENSMUST00000199087 565 ntBASIC4.32□□□□□ -1.72
H3f3aP84244 Gm42666-201ENSMUST00000201954 152 ntBASIC4.32□□□□□ -1.72
H3f3aP84244 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC4.32□□□□□ -1.72
H3f3aP84244 Gm19201-201ENSMUST00000210127 778 ntBASIC4.32□□□□□ -1.72
H3f3aP84244 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC4.32□□□□□ -1.72
H3f3aP84244 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
H3f3aP84244 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.32□□□□□ -1.72
H3f3aP84244 AC121137.1-201ENSMUST00000225272 602 ntBASIC4.32□□□□□ -1.72
H3f3aP84244 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
H3f3aP84244 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
H3f3aP84244 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
H3f3aP84244 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC4.32□□□□□ -1.72
H3f3aP84244 Gm37762-201ENSMUST00000194515 3561 ntBASIC4.32□□□□□ -1.72
H3f3aP84244 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
H3f3aP84244 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.32□□□□□ -1.72
H3f3aP84244 Gm42615-201ENSMUST00000197704 1820 ntBASIC4.32□□□□□ -1.72
H3f3aP84244 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
H3f3aP84244 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms