Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm15750-201ENSMUST00000120970 616 ntBASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm22208-201ENSMUST00000122658 110 ntBASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm22383-201ENSMUST00000158188 327 ntBASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm23069-201ENSMUST00000158240 311 ntBASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm3140-201ENSMUST00000163523 481 ntBASIC6.21□□□□□ -1.42
Hoxd9P28357 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm24155-201ENSMUST00000175259 110 ntBASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm6061-201ENSMUST00000175860 492 ntBASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm26988-201ENSMUST00000183296 945 ntBASIC6.21□□□□□ -1.42
Hoxd9P28357 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm28149-201ENSMUST00000187102 378 ntBASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm28768-201ENSMUST00000189034 378 ntBASIC6.21□□□□□ -1.42
Hoxd9P28357 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm18849-201ENSMUST00000189861 560 ntBASIC6.21□□□□□ -1.42
Hoxd9P28357 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm8747-201ENSMUST00000195392 751 ntBASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm42437-201ENSMUST00000197263 923 ntBASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm44655-201ENSMUST00000207768 423 ntBASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC6.21□□□□□ -1.42
Hoxd9P28357 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd9P28357 AC122225.1-201ENSMUST00000215641 369 ntBASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm2628-201ENSMUST00000218019 426 ntBASIC6.21□□□□□ -1.42
Hoxd9P28357 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.21□□□□□ -1.42
Hoxd9P28357 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC6.21□□□□□ -1.42
Hoxd9P28357 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.21□□□□□ -1.42
Hoxd9P28357 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.21□□□□□ -1.42
Hoxd9P28357 AC123533.2-201ENSMUST00000228176 375 ntBASIC6.21□□□□□ -1.42
Hoxd9P28357 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd9P28357 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd9P28357 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Hoxd9P28357 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd9P28357 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd9P28357 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.21□□□□□ -1.42
Hoxd9P28357 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd9P28357 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd9P28357 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Hoxd9P28357 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm42841-201ENSMUST00000199806 1932 ntBASIC6.21□□□□□ -1.42
Hoxd9P28357 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Hoxd9P28357 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd9P28357 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd9P28357 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd9P28357 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd9P28357 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd9P28357 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd9P28357 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd9P28357 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Hoxd9P28357 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd9P28357 AC152922.2-201ENSMUST00000213353 3879 ntBASIC6.2□□□□□ -1.42
Hoxd9P28357 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Hoxd9P28357 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.2□□□□□ -1.42
Hoxd9P28357 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC6.2□□□□□ -1.42
Hoxd9P28357 Gm38388-201ENSMUST00000195569 1430 ntBASIC6.2□□□□□ -1.42
Hoxd9P28357 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
Hoxd9P28357 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Hoxd9P28357 Gm26340-201ENSMUST00000102365 99 ntBASIC6.2□□□□□ -1.42
Hoxd9P28357 Gm23578-201ENSMUST00000103943 104 ntBASIC6.2□□□□□ -1.42
Hoxd9P28357 Gm22267-201ENSMUST00000104008 131 ntBASIC6.2□□□□□ -1.42
Hoxd9P28357 Gm24338-201ENSMUST00000104205 127 ntBASIC6.2□□□□□ -1.42
Hoxd9P28357 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd9P28357 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Hoxd9P28357 Gm14733-201ENSMUST00000117680 133 ntBASIC6.2□□□□□ -1.42
Hoxd9P28357 Gm15715-201ENSMUST00000118032 283 ntBASIC6.2□□□□□ -1.42
Hoxd9P28357 Gm13265-201ENSMUST00000118090 421 ntBASIC6.2□□□□□ -1.42
Hoxd9P28357 Gm15167-201ENSMUST00000121997 187 ntBASIC6.2□□□□□ -1.42
Hoxd9P28357 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd9P28357 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC6.2□□□□□ -1.42
Hoxd9P28357 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
Hoxd9P28357 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC6.2□□□□□ -1.42
Hoxd9P28357 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC6.2□□□□□ -1.42
Hoxd9P28357 Gm24812-201ENSMUST00000175315 284 ntBASIC6.2□□□□□ -1.42
Hoxd9P28357 Gm5527-201ENSMUST00000179821 642 ntBASIC6.2□□□□□ -1.42
Hoxd9P28357 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd9P28357 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC6.2□□□□□ -1.42
Hoxd9P28357 Gm21614-201ENSMUST00000183260 1005 ntBASIC6.2□□□□□ -1.42
Hoxd9P28357 Mir6348-201ENSMUST00000183804 120 ntBASIC6.2□□□□□ -1.42
Hoxd9P28357 Gm20561-201ENSMUST00000188131 292 ntBASIC6.2□□□□□ -1.42
Hoxd9P28357 Gm37243-201ENSMUST00000193407 595 ntBASIC6.2□□□□□ -1.42
Hoxd9P28357 Gm43115-201ENSMUST00000196244 160 ntBASIC6.2□□□□□ -1.42
Hoxd9P28357 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC6.2□□□□□ -1.42
Hoxd9P28357 AC134333.1-201ENSMUST00000204536 944 ntBASIC6.2□□□□□ -1.42
Hoxd9P28357 Gm45438-201ENSMUST00000210242 564 ntBASIC6.2□□□□□ -1.42
Hoxd9P28357 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
Hoxd9P28357 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC6.2□□□□□ -1.42
Hoxd9P28357 AC124826.1-201ENSMUST00000221651 325 ntBASIC6.2□□□□□ -1.42
Hoxd9P28357 Mylf-ps-201ENSMUST00000222174 421 ntBASIC6.2□□□□□ -1.42
Hoxd9P28357 AC140288.1-201ENSMUST00000226329 503 ntBASIC6.2□□□□□ -1.42
Hoxd9P28357 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd9P28357 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms