Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 AC130661.1-201ENSMUST00000218248 1680 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Hoxd3P09027 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxd3P09027 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxd3P09027 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Hoxd3P09027 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxd3P09027 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxd3P09027 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxd3P09027 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm37080-201ENSMUST00000194804 2404 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Hoxd3P09027 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Hoxd3P09027 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Hoxd3P09027 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm26417-201ENSMUST00000104274 135 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm13880-201ENSMUST00000118421 474 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm11409-201ENSMUST00000118621 403 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm11313-201ENSMUST00000118779 432 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm12740-201ENSMUST00000118794 308 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm14563-201ENSMUST00000120571 354 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm11829-201ENSMUST00000121003 282 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm12893-201ENSMUST00000121732 275 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm23837-201ENSMUST00000122656 286 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm24504-201ENSMUST00000157679 100 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm26321-201ENSMUST00000157740 242 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm15812-201ENSMUST00000162331 748 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm44370-201ENSMUST00000175436 112 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm26180-201ENSMUST00000179942 107 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm8245-201ENSMUST00000182434 987 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Mir6908-201ENSMUST00000184056 63 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm29385-201ENSMUST00000186831 363 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm43804-201ENSMUST00000198280 456 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm2860-201ENSMUST00000199226 707 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm43710-201ENSMUST00000199583 452 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm4585-201ENSMUST00000207218 452 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm45782-201ENSMUST00000212670 366 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC5.48□□□□□ -1.53
Hoxd3P09027 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC5.48□□□□□ -1.53
Hoxd3P09027 AC160958.1-201ENSMUST00000224833 368 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 AC122393.3-201ENSMUST00000226343 1059 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 AC155237.2-201ENSMUST00000228487 478 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Hoxd3P09027 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm26447-201ENSMUST00000082448 129 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
Hoxd3P09027 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm38375-201ENSMUST00000194610 2227 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Hoxd3P09027 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Hoxd3P09027 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC5.48□□□□□ -1.53
Hoxd3P09027 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm43022-201ENSMUST00000197067 4268 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC5.48□□□□□ -1.53
Hoxd3P09027 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxd3P09027 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm8675-201ENSMUST00000201408 1856 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm45174-201ENSMUST00000208884 3065 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm43842-201ENSMUST00000202890 2982 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 AC159264.1-201ENSMUST00000224844 4257 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms