Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 AC140299.2-201ENSMUST00000219546 1969 ntBASIC4.82□□□□□ -1.64
H2afb2S4R1M3 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Gm37174-201ENSMUST00000194699 3058 ntBASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Gm43011-201ENSMUST00000197897 4433 ntBASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Gm13250-201ENSMUST00000117209 753 ntBASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Gm16106-201ENSMUST00000119187 294 ntBASIC4.82□□□□□ -1.64
H2afb2S4R1M3 n-R5s30-201ENSMUST00000122624 122 ntBASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Gm29011-201ENSMUST00000191059 712 ntBASIC4.82□□□□□ -1.64
H2afb2S4R1M3 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Gm42983-201ENSMUST00000199879 815 ntBASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Gm43136-201ENSMUST00000200403 636 ntBASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Gm4574-201ENSMUST00000207804 542 ntBASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Gm19170-201ENSMUST00000212440 1084 ntBASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC4.82□□□□□ -1.64
H2afb2S4R1M3 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.82□□□□□ -1.64
H2afb2S4R1M3 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Gm37226-201ENSMUST00000191644 3255 ntBASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC4.81□□□□□ -1.64
H2afb2S4R1M3 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Gm28240-201ENSMUST00000187560 2053 ntBASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 n-R5s16-201ENSMUST00000104555 119 ntBASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Gm12041-201ENSMUST00000121606 602 ntBASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Gm16254-201ENSMUST00000131528 730 ntBASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Gm27551-201ENSMUST00000184258 77 ntBASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Gm28660-201ENSMUST00000186496 253 ntBASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Gm8480-201ENSMUST00000190350 698 ntBASIC4.81□□□□□ -1.64
H2afb2S4R1M3 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Gm37319-201ENSMUST00000193500 636 ntBASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Gm20239-201ENSMUST00000196610 982 ntBASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Gm8891-201ENSMUST00000198546 832 ntBASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 AC142113.2-201ENSMUST00000217425 748 ntBASIC4.81□□□□□ -1.64
H2afb2S4R1M3 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Gm19073-201ENSMUST00000219978 555 ntBASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 AC152169.2-201ENSMUST00000224558 613 ntBASIC4.81□□□□□ -1.64
H2afb2S4R1M3 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.81□□□□□ -1.64
H2afb2S4R1M3 AC125539.2-202ENSMUST00000227983 587 ntBASIC4.81□□□□□ -1.64
H2afb2S4R1M3 AC125539.2-201ENSMUST00000228339 753 ntBASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb2S4R1M3 Gm37762-201ENSMUST00000194515 3561 ntBASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms