Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm13930-201ENSMUST00000118569 368 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm15034-201ENSMUST00000120043 349 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm9225-201ENSMUST00000121921 836 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm10364-202ENSMUST00000153034 1001 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm22261-201ENSMUST00000158691 324 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Mir8120-201ENSMUST00000185035 139 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm28094-201ENSMUST00000185262 390 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Scgb2b6-201ENSMUST00000188132 330 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm28080-201ENSMUST00000188552 722 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm37164-201ENSMUST00000192809 637 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm43516-201ENSMUST00000196891 322 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm8182-201ENSMUST00000197863 769 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm5551-201ENSMUST00000199720 690 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm4501-201ENSMUST00000207330 551 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm4558-201ENSMUST00000207886 521 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm4528-201ENSMUST00000207905 551 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim39Q9ESN2 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm45725-201ENSMUST00000212962 337 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm2774-201ENSMUST00000213650 1165 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 AC147240.1-201ENSMUST00000218767 431 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm3678-201ENSMUST00000218888 492 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim39Q9ESN2 AC153548.2-201ENSMUST00000219770 885 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC6.16□□□□□ -1.42
Trim39Q9ESN2 AC163646.1-201ENSMUST00000227704 397 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm25141-201ENSMUST00000083177 107 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim39Q9ESN2 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 CT030159.1-201ENSMUST00000221580 2261 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm37250-201ENSMUST00000194919 2388 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm42992-201ENSMUST00000197043 6836 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.16□□□□□ -1.42
Trim39Q9ESN2 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Gm13712-201ENSMUST00000117484 2295 ntBASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Gm44248-201ENSMUST00000203079 1549 ntBASIC6.15□□□□□ -1.42
Trim39Q9ESN2 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Gm13416-201ENSMUST00000117264 1612 ntBASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Gm24275-201ENSMUST00000116780 146 ntBASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Gm9059-201ENSMUST00000118319 183 ntBASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Gm15129-201ENSMUST00000119673 279 ntBASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Gm21959-201ENSMUST00000178439 452 ntBASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Gm27640-201ENSMUST00000184580 147 ntBASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Gm29470-201ENSMUST00000188007 696 ntBASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Gm18698-201ENSMUST00000192327 668 ntBASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Gm44468-201ENSMUST00000199516 105 ntBASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Gm44794-201ENSMUST00000206550 411 ntBASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC6.15□□□□□ -1.42
Trim39Q9ESN2 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms