Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm43022-201ENSMUST00000197067 4268 ntBASIC7.61□□□□□ -1.19
Ube3bQ9ES34 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ube3bQ9ES34 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ube3bQ9ES34 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ube3bQ9ES34 Gm38142-201ENSMUST00000194093 3555 ntBASIC7.61□□□□□ -1.19
Ube3bQ9ES34 Gm12633-201ENSMUST00000117742 1705 ntBASIC7.61□□□□□ -1.19
Ube3bQ9ES34 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm28874-201ENSMUST00000190917 3134 ntBASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm23311-201ENSMUST00000104152 134 ntBASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm13400-201ENSMUST00000117436 380 ntBASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm11976-201ENSMUST00000119236 295 ntBASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm14679-201ENSMUST00000121536 722 ntBASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm11787-201ENSMUST00000121996 1050 ntBASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm25292-201ENSMUST00000122797 322 ntBASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm23473-201ENSMUST00000158883 116 ntBASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm9071-201ENSMUST00000165915 474 ntBASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm20620-201ENSMUST00000177528 168 ntBASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm27428-201ENSMUST00000184289 110 ntBASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm18969-201ENSMUST00000189423 730 ntBASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm37603-201ENSMUST00000192368 219 ntBASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm43516-201ENSMUST00000196891 322 ntBASIC7.6□□□□□ -1.19
Ube3bQ9ES34 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC7.6□□□□□ -1.19
Ube3bQ9ES34 AC134333.1-201ENSMUST00000204536 944 ntBASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm4083-201ENSMUST00000207158 451 ntBASIC7.6□□□□□ -1.19
Ube3bQ9ES34 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm2996-201ENSMUST00000211398 537 ntBASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm45473-201ENSMUST00000211452 616 ntBASIC7.6□□□□□ -1.19
Ube3bQ9ES34 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm23406-201ENSMUST00000082537 122 ntBASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm22423-201ENSMUST00000082861 184 ntBASIC7.6□□□□□ -1.19
Ube3bQ9ES34 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC7.6□□□□□ -1.19
Ube3bQ9ES34 AC152922.2-201ENSMUST00000213353 3879 ntBASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm38082-201ENSMUST00000192800 6882 ntBASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Gm42507-201ENSMUST00000201187 2555 ntBASIC7.6□□□□□ -1.19
Ube3bQ9ES34 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Gm20172-201ENSMUST00000193138 1551 ntBASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ube3bQ9ES34 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC7.59□□□□□ -1.19
Ube3bQ9ES34 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Gm25879-201ENSMUST00000104330 107 ntBASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Gm11352-201ENSMUST00000119264 517 ntBASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Gm13603-201ENSMUST00000119404 83 ntBASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Gm11794-201ENSMUST00000119446 237 ntBASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Gm23069-201ENSMUST00000158240 311 ntBASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Gm23386-201ENSMUST00000158585 144 ntBASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Gm28299-201ENSMUST00000189908 339 ntBASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Gm6074-201ENSMUST00000193340 451 ntBASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Gm38218-201ENSMUST00000193555 4689 ntBASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Ighv1-14-201ENSMUST00000194015 402 ntBASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Gm45438-201ENSMUST00000210242 564 ntBASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Gm3266-201ENSMUST00000217832 591 ntBASIC7.59□□□□□ -1.19
Ube3bQ9ES34 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ube3bQ9ES34 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Gm7045-201ENSMUST00000221466 605 ntBASIC7.59□□□□□ -1.19
Ube3bQ9ES34 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Gm6990-201ENSMUST00000086830 348 ntBASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Gm38156-201ENSMUST00000194601 2260 ntBASIC7.59□□□□□ -1.19
Ube3bQ9ES34 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Gm37940-201ENSMUST00000194243 3251 ntBASIC7.59□□□□□ -1.19
Ube3bQ9ES34 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC7.59□□□□□ -1.19
Ube3bQ9ES34 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms