Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm17766-201ENSMUST00000209223 442 ntBASIC4.66□□□□□ -1.66
Cdc40Q9DC48 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC4.66□□□□□ -1.66
Cdc40Q9DC48 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC4.66□□□□□ -1.66
Cdc40Q9DC48 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.66□□□□□ -1.66
Cdc40Q9DC48 Gm5176-201ENSMUST00000218244 1227 ntBASIC4.66□□□□□ -1.66
Cdc40Q9DC48 Gm19095-201ENSMUST00000220533 730 ntBASIC4.66□□□□□ -1.66
Cdc40Q9DC48 AC157515.1-201ENSMUST00000220953 450 ntBASIC4.66□□□□□ -1.66
Cdc40Q9DC48 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC4.66□□□□□ -1.66
Cdc40Q9DC48 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Cdc40Q9DC48 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Cdc40Q9DC48 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Cdc40Q9DC48 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.66□□□□□ -1.66
Cdc40Q9DC48 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC4.66□□□□□ -1.66
Cdc40Q9DC48 AC123705.3-201ENSMUST00000223531 2069 ntBASIC4.66□□□□□ -1.66
Cdc40Q9DC48 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Cdc40Q9DC48 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdc40Q9DC48 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Cdc40Q9DC48 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Cdc40Q9DC48 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC4.65□□□□□ -1.66
Cdc40Q9DC48 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
Cdc40Q9DC48 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Cdc40Q9DC48 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Cdc40Q9DC48 Gm14711-201ENSMUST00000117056 217 ntBASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Gm15670-201ENSMUST00000117740 447 ntBASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Gm15772-201ENSMUST00000118533 438 ntBASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Gm13503-201ENSMUST00000119017 446 ntBASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Gm11759-201ENSMUST00000121742 464 ntBASIC4.65□□□□□ -1.67
Cdc40Q9DC48 n-R5s61-201ENSMUST00000122711 118 ntBASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Gm16345-201ENSMUST00000146065 158 ntBASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Gm22870-201ENSMUST00000157501 112 ntBASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Gm23534-201ENSMUST00000157539 97 ntBASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Gm22312-201ENSMUST00000158005 130 ntBASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Gm17152-201ENSMUST00000172430 535 ntBASIC4.65□□□□□ -1.67
Cdc40Q9DC48 S100a11-ps-201ENSMUST00000181735 306 ntBASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Gm19086-201ENSMUST00000190772 665 ntBASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Gm38011-201ENSMUST00000193312 279 ntBASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Gm37720-201ENSMUST00000195497 1241 ntBASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Gm42459-201ENSMUST00000199679 742 ntBASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Gm18924-201ENSMUST00000211929 316 ntBASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Cdc40Q9DC48 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Gm45149-201ENSMUST00000206459 2172 ntBASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Gm42535-201ENSMUST00000197312 1399 ntBASIC4.65□□□□□ -1.67
Cdc40Q9DC48 Gm19666-201ENSMUST00000198176 1893 ntBASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Gm37226-201ENSMUST00000191644 3255 ntBASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Gm11486-201ENSMUST00000107322 478 ntBASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Gm23879-201ENSMUST00000116874 126 ntBASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Gm11366-201ENSMUST00000119279 429 ntBASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Gm14046-201ENSMUST00000119389 509 ntBASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Gm6632-201ENSMUST00000168425 954 ntBASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Gm22923-201ENSMUST00000174952 110 ntBASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Gm24949-201ENSMUST00000183609 215 ntBASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Gm5511-201ENSMUST00000189380 802 ntBASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Gm8480-201ENSMUST00000190350 698 ntBASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Gm43919-201ENSMUST00000204303 364 ntBASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Gm23972-201ENSMUST00000083322 165 ntBASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Gm43490-201ENSMUST00000197593 2652 ntBASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Gm10933-201ENSMUST00000221891 1861 ntBASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Gm43281-201ENSMUST00000202522 2704 ntBASIC4.64□□□□□ -1.67
Cdc40Q9DC48 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms