Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.38□□□□□ -1.55
Usp11Q99K46 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC5.38□□□□□ -1.55
Usp11Q99K46 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Usp11Q99K46 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Usp11Q99K46 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.38□□□□□ -1.55
Usp11Q99K46 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Usp11Q99K46 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
Usp11Q99K46 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
Usp11Q99K46 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.37□□□□□ -1.55
Usp11Q99K46 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.37□□□□□ -1.55
Usp11Q99K46 Gm14912-201ENSMUST00000120166 1773 ntBASIC5.37□□□□□ -1.55
Usp11Q99K46 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
Usp11Q99K46 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Usp11Q99K46 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.37□□□□□ -1.55
Usp11Q99K46 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Usp11Q99K46 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
Usp11Q99K46 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Usp11Q99K46 Gm38264-201ENSMUST00000194850 2032 ntBASIC5.37□□□□□ -1.55
Usp11Q99K46 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Usp11Q99K46 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.37□□□□□ -1.55
Usp11Q99K46 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Usp11Q99K46 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.37□□□□□ -1.55
Usp11Q99K46 Gm13488-201ENSMUST00000120419 179 ntBASIC5.37□□□□□ -1.55
Usp11Q99K46 Gm11805-201ENSMUST00000121238 600 ntBASIC5.37□□□□□ -1.55
Usp11Q99K46 Gm14713-201ENSMUST00000122362 686 ntBASIC5.37□□□□□ -1.55
Usp11Q99K46 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC5.37□□□□□ -1.55
Usp11Q99K46 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Usp11Q99K46 Gm22895-201ENSMUST00000157508 308 ntBASIC5.37□□□□□ -1.55
Usp11Q99K46 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC5.37□□□□□ -1.55
Usp11Q99K46 Gm16285-201ENSMUST00000162999 347 ntBASIC5.37□□□□□ -1.55
Usp11Q99K46 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.37□□□□□ -1.55
Usp11Q99K46 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC5.37□□□□□ -1.55
Usp11Q99K46 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.37□□□□□ -1.55
Usp11Q99K46 Gm27820-201ENSMUST00000183628 175 ntBASIC5.37□□□□□ -1.55
Usp11Q99K46 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.37□□□□□ -1.55
Usp11Q99K46 Gm37741-201ENSMUST00000191768 1256 ntBASIC5.37□□□□□ -1.55
Usp11Q99K46 Gm7496-201ENSMUST00000192573 1034 ntBASIC5.37□□□□□ -1.55
Usp11Q99K46 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC5.37□□□□□ -1.55
Usp11Q99K46 Gm42454-201ENSMUST00000196805 1181 ntBASIC5.37□□□□□ -1.55
Usp11Q99K46 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC5.37□□□□□ -1.55
Usp11Q99K46 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.37□□□□□ -1.55
Usp11Q99K46 Igkv12-66-201ENSMUST00000199305 348 ntBASIC5.37□□□□□ -1.55
Usp11Q99K46 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Usp11Q99K46 Gm6850-201ENSMUST00000210031 530 ntBASIC5.37□□□□□ -1.55
Usp11Q99K46 Gm17999-201ENSMUST00000211568 542 ntBASIC5.37□□□□□ -1.55
Usp11Q99K46 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC5.37□□□□□ -1.55
Usp11Q99K46 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.37□□□□□ -1.55
Usp11Q99K46 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.37□□□□□ -1.55
Usp11Q99K46 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Usp11Q99K46 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Usp11Q99K46 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC5.37□□□□□ -1.55
Usp11Q99K46 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Usp11Q99K46 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Usp11Q99K46 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.37□□□□□ -1.55
Usp11Q99K46 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Usp11Q99K46 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Usp11Q99K46 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Usp11Q99K46 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Usp11Q99K46 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.36□□□□□ -1.55
Usp11Q99K46 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.36□□□□□ -1.55
Usp11Q99K46 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.36□□□□□ -1.55
Usp11Q99K46 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.36□□□□□ -1.55
Usp11Q99K46 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Usp11Q99K46 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Usp11Q99K46 Gm9429-201ENSMUST00000117804 868 ntBASIC5.36□□□□□ -1.55
Usp11Q99K46 Gm15361-201ENSMUST00000119320 444 ntBASIC5.36□□□□□ -1.55
Usp11Q99K46 Gm12807-201ENSMUST00000121546 962 ntBASIC5.36□□□□□ -1.55
Usp11Q99K46 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Usp11Q99K46 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.36□□□□□ -1.55
Usp11Q99K46 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC5.36□□□□□ -1.55
Usp11Q99K46 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC5.36□□□□□ -1.55
Usp11Q99K46 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Usp11Q99K46 Gm27427-201ENSMUST00000185134 193 ntBASIC5.36□□□□□ -1.55
Usp11Q99K46 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC5.36□□□□□ -1.55
Usp11Q99K46 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC5.36□□□□□ -1.55
Usp11Q99K46 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC5.36□□□□□ -1.55
Usp11Q99K46 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC5.36□□□□□ -1.55
Usp11Q99K46 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Usp11Q99K46 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC5.36□□□□□ -1.55
Usp11Q99K46 Gm37659-201ENSMUST00000194574 111 ntBASIC5.36□□□□□ -1.55
Usp11Q99K46 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Usp11Q99K46 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC5.36□□□□□ -1.55
Usp11Q99K46 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.36□□□□□ -1.55
Usp11Q99K46 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Usp11Q99K46 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Usp11Q99K46 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC5.36□□□□□ -1.55
Usp11Q99K46 Gm44281-201ENSMUST00000203090 166 ntBASIC5.36□□□□□ -1.55
Usp11Q99K46 Gm18468-201ENSMUST00000207321 369 ntBASIC5.36□□□□□ -1.55
Usp11Q99K46 Gm18470-201ENSMUST00000207467 420 ntBASIC5.36□□□□□ -1.55
Usp11Q99K46 Gm18465-201ENSMUST00000207468 369 ntBASIC5.36□□□□□ -1.55
Usp11Q99K46 Gm18464-201ENSMUST00000207803 420 ntBASIC5.36□□□□□ -1.55
Usp11Q99K46 Gm18458-201ENSMUST00000207908 369 ntBASIC5.36□□□□□ -1.55
Usp11Q99K46 Gm18461-201ENSMUST00000208421 420 ntBASIC5.36□□□□□ -1.55
Usp11Q99K46 Gm4587-201ENSMUST00000209135 637 ntBASIC5.36□□□□□ -1.55
Usp11Q99K46 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.36□□□□□ -1.55
Usp11Q99K46 AC138284.5-201ENSMUST00000214389 652 ntBASIC5.36□□□□□ -1.55
Usp11Q99K46 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC5.36□□□□□ -1.55
Usp11Q99K46 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.36□□□□□ -1.55
Usp11Q99K46 AC126043.1-201ENSMUST00000221304 1141 ntBASIC5.36□□□□□ -1.55
Usp11Q99K46 AC162934.3-201ENSMUST00000223015 841 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms