Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Pcdhb3Q91XZ7 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Pcdhb3Q91XZ7 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Pcdhb3Q91XZ7 Gm44567-201ENSMUST00000205645 2631 ntBASIC6.99□□□□□ -1.29
Pcdhb3Q91XZ7 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Pcdhb3Q91XZ7 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Pcdhb3Q91XZ7 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.99□□□□□ -1.29
Pcdhb3Q91XZ7 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC6.99□□□□□ -1.29
Pcdhb3Q91XZ7 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Pcdhb3Q91XZ7 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Pcdhb3Q91XZ7 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Pcdhb3Q91XZ7 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Pcdhb3Q91XZ7 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Pcdhb3Q91XZ7 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Mir678-201ENSMUST00000102114 84 ntBASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Mir669e-201ENSMUST00000117003 119 ntBASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Gm12149-201ENSMUST00000117511 654 ntBASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Gm11227-201ENSMUST00000119774 471 ntBASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Gm14815-201ENSMUST00000120060 488 ntBASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Gm22940-201ENSMUST00000158560 155 ntBASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Gm29038-201ENSMUST00000191543 678 ntBASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Gm2719-201ENSMUST00000191929 444 ntBASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Gm37322-201ENSMUST00000193409 337 ntBASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Gm37495-201ENSMUST00000194590 264 ntBASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Igkv2-107-201ENSMUST00000196000 313 ntBASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Gm2287-202ENSMUST00000199619 1000 ntBASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Gm43226-201ENSMUST00000202438 259 ntBASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Gm43914-201ENSMUST00000203592 594 ntBASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Gm44523-201ENSMUST00000205616 417 ntBASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Gm18488-201ENSMUST00000215082 364 ntBASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Gm35262-201ENSMUST00000215133 267 ntBASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Gm9315-201ENSMUST00000222696 908 ntBASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 AL589742.1-201ENSMUST00000226034 349 ntBASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 CT009480.3-201ENSMUST00000224051 3032 ntBASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Gm7195-201ENSMUST00000190869 1707 ntBASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Pcdhb3Q91XZ7 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Pcdhb3Q91XZ7 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.97□□□□□ -1.29
Pcdhb3Q91XZ7 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Pcdhb3Q91XZ7 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC6.97□□□□□ -1.29
Pcdhb3Q91XZ7 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Pcdhb3Q91XZ7 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Pcdhb3Q91XZ7 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Pcdhb3Q91XZ7 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.97□□□□□ -1.29
Pcdhb3Q91XZ7 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Pcdhb3Q91XZ7 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Pcdhb3Q91XZ7 Gm23691-201ENSMUST00000101878 107 ntBASIC6.97□□□□□ -1.29
Pcdhb3Q91XZ7 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC6.97□□□□□ -1.29
Pcdhb3Q91XZ7 Gm25097-201ENSMUST00000104042 145 ntBASIC6.97□□□□□ -1.29
Pcdhb3Q91XZ7 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Pcdhb3Q91XZ7 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Pcdhb3Q91XZ7 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC6.97□□□□□ -1.29
Pcdhb3Q91XZ7 Gm11936-201ENSMUST00000118323 160 ntBASIC6.97□□□□□ -1.29
Pcdhb3Q91XZ7 Gm15177-201ENSMUST00000120491 577 ntBASIC6.97□□□□□ -1.29
Pcdhb3Q91XZ7 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Pcdhb3Q91XZ7 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC6.97□□□□□ -1.29
Pcdhb3Q91XZ7 Trav8-2-201ENSMUST00000130122 337 ntBASIC6.97□□□□□ -1.29
Pcdhb3Q91XZ7 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC6.97□□□□□ -1.29
Pcdhb3Q91XZ7 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC6.97□□□□□ -1.29
Pcdhb3Q91XZ7 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC6.97□□□□□ -1.29
Pcdhb3Q91XZ7 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms