Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm3665-201ENSMUST00000177214 2461 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm6664-201ENSMUST00000119138 468 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm14115-201ENSMUST00000119242 482 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm11410-201ENSMUST00000120053 1143 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Snora47-201ENSMUST00000157483 138 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm23539-201ENSMUST00000157537 224 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm24395-201ENSMUST00000158139 125 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm23824-201ENSMUST00000158741 276 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm17121-201ENSMUST00000170414 847 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm17222-201ENSMUST00000180135 847 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm27919-201ENSMUST00000185163 107 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm29551-201ENSMUST00000190913 698 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm37203-201ENSMUST00000191618 385 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm31230-201ENSMUST00000199725 785 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm2314-201ENSMUST00000200391 586 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm19237-201ENSMUST00000205036 1132 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm20997-201ENSMUST00000205148 231 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm45226-201ENSMUST00000206602 288 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm45874-201ENSMUST00000212423 346 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm8125-201ENSMUST00000216602 738 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm3800-201ENSMUST00000221086 554 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 AC166574.7-201ENSMUST00000228502 704 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Snora44-201ENSMUST00000082670 129 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm38322-201ENSMUST00000194074 2300 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm43843-201ENSMUST00000202396 1587 ntBASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.63□□□□□ -1.51
Ndc1Q8VCB1 Gm42873-201ENSMUST00000196110 1726 ntBASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 AC160028.2-201ENSMUST00000218937 2519 ntBASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 Gm13614-201ENSMUST00000117306 503 ntBASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 Gm13811-201ENSMUST00000117800 256 ntBASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 Gm13579-201ENSMUST00000118519 517 ntBASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 Gm14970-201ENSMUST00000122289 355 ntBASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 n-R5s207-201ENSMUST00000122497 118 ntBASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 Gm23981-201ENSMUST00000157136 106 ntBASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 Gm26349-201ENSMUST00000157530 130 ntBASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 Gm25459-201ENSMUST00000157953 114 ntBASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 Gm22519-201ENSMUST00000158270 178 ntBASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 Gm23408-201ENSMUST00000158523 265 ntBASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC5.62□□□□□ -1.51
Ndc1Q8VCB1 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms