Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm19057-201ENSMUST00000194329 1197 ntBASIC6.33□□□□□ -1.4
Brf1Q8CFK2 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Brf1Q8CFK2 Gm33952-201ENSMUST00000197795 408 ntBASIC6.33□□□□□ -1.4
Brf1Q8CFK2 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC6.33□□□□□ -1.4
Brf1Q8CFK2 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Brf1Q8CFK2 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Brf1Q8CFK2 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC6.33□□□□□ -1.4
Brf1Q8CFK2 Gm17838-201ENSMUST00000205872 876 ntBASIC6.33□□□□□ -1.4
Brf1Q8CFK2 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Brf1Q8CFK2 AC112956.1-201ENSMUST00000213563 492 ntBASIC6.33□□□□□ -1.4
Brf1Q8CFK2 AC110381.1-201ENSMUST00000218987 586 ntBASIC6.33□□□□□ -1.4
Brf1Q8CFK2 AC183092.2-201ENSMUST00000225542 1153 ntBASIC6.33□□□□□ -1.4
Brf1Q8CFK2 AC102815.1-201ENSMUST00000226662 1061 ntBASIC6.33□□□□□ -1.4
Brf1Q8CFK2 AC132918.1-201ENSMUST00000227877 925 ntBASIC6.33□□□□□ -1.4
Brf1Q8CFK2 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Brf1Q8CFK2 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Brf1Q8CFK2 Gm24525-201ENSMUST00000082917 151 ntBASIC6.33□□□□□ -1.4
Brf1Q8CFK2 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Brf1Q8CFK2 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Brf1Q8CFK2 Gm9386-201ENSMUST00000095195 381 ntBASIC6.33□□□□□ -1.4
Brf1Q8CFK2 Gm13928-201ENSMUST00000120326 1732 ntBASIC6.33□□□□□ -1.4
Brf1Q8CFK2 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Brf1Q8CFK2 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
Brf1Q8CFK2 Gm9700-201ENSMUST00000193786 1617 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Brf1Q8CFK2 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Gm14885-201ENSMUST00000117969 496 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Gm12090-201ENSMUST00000118692 758 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Gm12007-201ENSMUST00000120978 597 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Gm14463-201ENSMUST00000121117 498 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Gm12422-201ENSMUST00000121431 302 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 n-R5s98-201ENSMUST00000122549 119 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Gm22895-201ENSMUST00000157508 308 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Gm23354-201ENSMUST00000158426 104 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Gm24175-201ENSMUST00000158931 129 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Adgrg4-206ENSMUST00000168724 531 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Gm24417-201ENSMUST00000178123 79 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Gm24653-201ENSMUST00000178541 79 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Gm25934-201ENSMUST00000178642 79 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Mir6911-201ENSMUST00000184241 69 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Gm7299-201ENSMUST00000194441 581 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Gm18843-201ENSMUST00000194982 719 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Gm42857-201ENSMUST00000200823 339 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Gm44307-201ENSMUST00000204466 764 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Gm6056-201ENSMUST00000221253 488 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Gm9269-201ENSMUST00000221661 578 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 AC163646.1-201ENSMUST00000227704 397 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Gm26163-201ENSMUST00000083792 178 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Gm37357-201ENSMUST00000192386 3123 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 AC169985.1-201ENSMUST00000223648 2439 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
Brf1Q8CFK2 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Gm19136-201ENSMUST00000190706 2067 ntBASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Brf1Q8CFK2 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Gm19084-201ENSMUST00000222939 1762 ntBASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Gm11746-201ENSMUST00000119843 821 ntBASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Gm13537-201ENSMUST00000120467 267 ntBASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Gm16053-201ENSMUST00000120511 188 ntBASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Gm3835-201ENSMUST00000120752 403 ntBASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Gm11805-201ENSMUST00000121238 600 ntBASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Gm12650-201ENSMUST00000121966 258 ntBASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Gm11965-201ENSMUST00000122017 277 ntBASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Gm11575-201ENSMUST00000122243 228 ntBASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Gm11507-201ENSMUST00000156462 412 ntBASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Gm25861-201ENSMUST00000158251 109 ntBASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Gm22420-201ENSMUST00000178795 126 ntBASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Gm28017-201ENSMUST00000183434 126 ntBASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Mir7687-201ENSMUST00000184722 59 ntBASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Gm28353-201ENSMUST00000186482 570 ntBASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Gm28533-201ENSMUST00000186741 570 ntBASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Gm20770-201ENSMUST00000193474 694 ntBASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Gm37641-201ENSMUST00000193837 239 ntBASIC6.31□□□□□ -1.4
Brf1Q8CFK2 Gm42542-201ENSMUST00000197978 268 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 111.7 ms