Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Gm27853-201ENSMUST00000184176 250 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Gm29376-201ENSMUST00000189357 835 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Trbv9-201ENSMUST00000194494 290 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Gm45474-201ENSMUST00000209471 408 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Gm7760-201ENSMUST00000212265 578 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Gm7807-201ENSMUST00000212475 578 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Gm9321-201ENSMUST00000221179 778 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 CT009556.1-201ENSMUST00000227282 449 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 AC139197.1-201ENSMUST00000228332 813 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Gm5341-201ENSMUST00000058881 489 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Gm15732-201ENSMUST00000079794 480 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Mir421-201ENSMUST00000083575 76 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Gm10650-202ENSMUST00000196581 1969 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Gm42540-201ENSMUST00000200319 2008 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Gm45250-201ENSMUST00000209414 3592 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 AC122346.1-201ENSMUST00000225266 3732 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Gm15101-201ENSMUST00000178818 1502 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Gm43266-201ENSMUST00000201049 1771 ntBASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Gm15765-201ENSMUST00000118407 910 ntBASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Gm11227-201ENSMUST00000119774 471 ntBASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Gm14679-201ENSMUST00000121536 722 ntBASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Calr-ps-201ENSMUST00000121776 485 ntBASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Gm11341-201ENSMUST00000122316 447 ntBASIC7.15□□□□□ -1.26
Trim47Q8C0E3 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Gm16254-201ENSMUST00000131528 730 ntBASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Gm23579-201ENSMUST00000158528 103 ntBASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Gm23164-201ENSMUST00000175084 111 ntBASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Gm29334-201ENSMUST00000190334 357 ntBASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC7.15□□□□□ -1.26
Trim47Q8C0E3 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC7.15□□□□□ -1.26
Trim47Q8C0E3 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Gm20304-201ENSMUST00000218168 444 ntBASIC7.15□□□□□ -1.26
Trim47Q8C0E3 CT025667.1-201ENSMUST00000225872 382 ntBASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim47Q8C0E3 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Trim47Q8C0E3 AC124414.1-201ENSMUST00000218033 2946 ntBASIC7.15□□□□□ -1.27
Trim47Q8C0E3 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
Trim47Q8C0E3 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Trim47Q8C0E3 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC7.15□□□□□ -1.27
Trim47Q8C0E3 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC7.15□□□□□ -1.27
Trim47Q8C0E3 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Trim47Q8C0E3 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
Trim47Q8C0E3 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Trim47Q8C0E3 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Trim47Q8C0E3 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
Trim47Q8C0E3 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms