Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm25665-201ENSMUST00000157695 110 ntBASIC6.73□□□□□ -1.33
Usp47Q8BY87 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Usp47Q8BY87 Gm20657-201ENSMUST00000177079 515 ntBASIC6.73□□□□□ -1.33
Usp47Q8BY87 Gm8919-201ENSMUST00000182028 1014 ntBASIC6.73□□□□□ -1.33
Usp47Q8BY87 Mir1957b-201ENSMUST00000184608 123 ntBASIC6.73□□□□□ -1.33
Usp47Q8BY87 Gm27286-201ENSMUST00000184934 179 ntBASIC6.73□□□□□ -1.33
Usp47Q8BY87 Gm3145-201ENSMUST00000188584 220 ntBASIC6.73□□□□□ -1.33
Usp47Q8BY87 Gm37632-201ENSMUST00000191811 1142 ntBASIC6.73□□□□□ -1.33
Usp47Q8BY87 Gm2622-201ENSMUST00000200018 471 ntBASIC6.73□□□□□ -1.33
Usp47Q8BY87 Gm44757-201ENSMUST00000206373 157 ntBASIC6.73□□□□□ -1.33
Usp47Q8BY87 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC6.73□□□□□ -1.33
Usp47Q8BY87 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC6.73□□□□□ -1.33
Usp47Q8BY87 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC6.73□□□□□ -1.33
Usp47Q8BY87 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC6.73□□□□□ -1.33
Usp47Q8BY87 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Usp47Q8BY87 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Usp47Q8BY87 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC6.73□□□□□ -1.33
Usp47Q8BY87 AC153144.1-201ENSMUST00000221759 3139 ntBASIC6.73□□□□□ -1.33
Usp47Q8BY87 CT009734.1-201ENSMUST00000227657 1687 ntBASIC6.73□□□□□ -1.33
Usp47Q8BY87 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Usp47Q8BY87 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Usp47Q8BY87 AC162938.2-205ENSMUST00000217551 2828 ntBASIC6.73□□□□□ -1.33
Usp47Q8BY87 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Usp47Q8BY87 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Usp47Q8BY87 AC123705.3-201ENSMUST00000223531 2069 ntBASIC6.72□□□□□ -1.33
Usp47Q8BY87 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC6.72□□□□□ -1.33
Usp47Q8BY87 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Usp47Q8BY87 Gm12237-201ENSMUST00000120158 470 ntBASIC6.72□□□□□ -1.33
Usp47Q8BY87 Gm4852-201ENSMUST00000121202 729 ntBASIC6.72□□□□□ -1.33
Usp47Q8BY87 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Usp47Q8BY87 Gm27387-201ENSMUST00000184583 116 ntBASIC6.72□□□□□ -1.33
Usp47Q8BY87 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Usp47Q8BY87 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Usp47Q8BY87 Gm6261-201ENSMUST00000204707 760 ntBASIC6.72□□□□□ -1.33
Usp47Q8BY87 Gm6177-201ENSMUST00000085589 465 ntBASIC6.72□□□□□ -1.33
Usp47Q8BY87 Gm14849-201ENSMUST00000122293 2846 ntBASIC6.72□□□□□ -1.33
Usp47Q8BY87 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC6.72□□□□□ -1.33
Usp47Q8BY87 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
Usp47Q8BY87 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Usp47Q8BY87 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
Usp47Q8BY87 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6.72□□□□□ -1.33
Usp47Q8BY87 AC151904.4-201ENSMUST00000219868 1319 ntBASIC6.72□□□□□ -1.33
Usp47Q8BY87 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Usp47Q8BY87 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Usp47Q8BY87 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC6.72□□□□□ -1.33
Usp47Q8BY87 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Usp47Q8BY87 Gm37726-201ENSMUST00000193246 3886 ntBASIC6.72□□□□□ -1.33
Usp47Q8BY87 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.72□□□□□ -1.33
Usp47Q8BY87 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Usp47Q8BY87 Gm15206-201ENSMUST00000119143 454 ntBASIC6.71□□□□□ -1.33
Usp47Q8BY87 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC6.71□□□□□ -1.33
Usp47Q8BY87 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Usp47Q8BY87 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC6.71□□□□□ -1.33
Usp47Q8BY87 Gm18382-201ENSMUST00000194394 582 ntBASIC6.71□□□□□ -1.33
Usp47Q8BY87 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC6.71□□□□□ -1.33
Usp47Q8BY87 CT030705.1-201ENSMUST00000223971 533 ntBASIC6.71□□□□□ -1.33
Usp47Q8BY87 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
Usp47Q8BY87 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
Usp47Q8BY87 n-R5s27-201ENSMUST00000093699 119 ntBASIC6.71□□□□□ -1.33
Usp47Q8BY87 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Usp47Q8BY87 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Usp47Q8BY87 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC6.71□□□□□ -1.33
Usp47Q8BY87 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp47Q8BY87 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp47Q8BY87 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Usp47Q8BY87 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC6.71□□□□□ -1.34
Usp47Q8BY87 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp47Q8BY87 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Usp47Q8BY87 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp47Q8BY87 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Usp47Q8BY87 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Usp47Q8BY87 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Usp47Q8BY87 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Usp47Q8BY87 Gm23014-201ENSMUST00000104144 130 ntBASIC6.7□□□□□ -1.34
Usp47Q8BY87 Mir879-201ENSMUST00000104703 76 ntBASIC6.7□□□□□ -1.34
Usp47Q8BY87 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC6.7□□□□□ -1.34
Usp47Q8BY87 Gm11633-201ENSMUST00000118176 444 ntBASIC6.7□□□□□ -1.34
Usp47Q8BY87 Gm15012-201ENSMUST00000119176 106 ntBASIC6.7□□□□□ -1.34
Usp47Q8BY87 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC6.7□□□□□ -1.34
Usp47Q8BY87 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Usp47Q8BY87 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC6.7□□□□□ -1.34
Usp47Q8BY87 Gm25427-201ENSMUST00000157605 103 ntBASIC6.7□□□□□ -1.34
Usp47Q8BY87 Gm25714-201ENSMUST00000158626 296 ntBASIC6.7□□□□□ -1.34
Usp47Q8BY87 Gm15796-201ENSMUST00000162135 204 ntBASIC6.7□□□□□ -1.34
Usp47Q8BY87 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Usp47Q8BY87 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Usp47Q8BY87 Gm38046-201ENSMUST00000192733 550 ntBASIC6.7□□□□□ -1.34
Usp47Q8BY87 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC6.7□□□□□ -1.34
Usp47Q8BY87 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC6.7□□□□□ -1.34
Usp47Q8BY87 Gm45007-201ENSMUST00000206237 366 ntBASIC6.7□□□□□ -1.34
Usp47Q8BY87 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC6.7□□□□□ -1.34
Usp47Q8BY87 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
Usp47Q8BY87 AL589742.1-201ENSMUST00000226034 349 ntBASIC6.7□□□□□ -1.34
Usp47Q8BY87 AC154627.3-201ENSMUST00000228441 334 ntBASIC6.7□□□□□ -1.34
Usp47Q8BY87 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Usp47Q8BY87 AC154227.1-201ENSMUST00000228809 2467 ntBASIC6.7□□□□□ -1.34
Usp47Q8BY87 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Usp47Q8BY87 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Usp47Q8BY87 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Usp47Q8BY87 Gm3978-201ENSMUST00000163406 2512 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms