Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm23014-201ENSMUST00000104144 130 ntBASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm13172-201ENSMUST00000118685 256 ntBASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm11484-201ENSMUST00000119808 338 ntBASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm24745-201ENSMUST00000157840 85 ntBASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm4574-201ENSMUST00000207804 542 ntBASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm3912-203ENSMUST00000211024 367 ntBASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm38368-201ENSMUST00000193181 1335 ntBASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm24371-201ENSMUST00000122662 267 ntBASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm24961-201ENSMUST00000157918 184 ntBASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm25861-201ENSMUST00000158251 109 ntBASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm9569-201ENSMUST00000187492 787 ntBASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm45434-201ENSMUST00000210550 293 ntBASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 CT009765.2-201ENSMUST00000221331 392 ntBASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm16394-201ENSMUST00000117289 675 ntBASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm23673-201ENSMUST00000157474 298 ntBASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 AC132433.1-201ENSMUST00000221553 1101 ntBASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Mir761-201ENSMUST00000103245 76 ntBASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm15034-201ENSMUST00000120043 349 ntBASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm27883-201ENSMUST00000183941 102 ntBASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm44648-201ENSMUST00000208267 329 ntBASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 AC154184.1-201ENSMUST00000224375 1620 ntBASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm15752-201ENSMUST00000117427 394 ntBASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm15779-201ENSMUST00000117470 412 ntBASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm15058-201ENSMUST00000117689 458 ntBASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm5391-201ENSMUST00000121155 613 ntBASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm22637-201ENSMUST00000158144 283 ntBASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm23046-201ENSMUST00000158369 284 ntBASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm44138-201ENSMUST00000204939 271 ntBASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 AC140930.4-201ENSMUST00000220750 150 ntBASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm24031-201ENSMUST00000083930 131 ntBASIC5.6□□□□□ -1.51
Ccdc88aQ5SNZ0 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms