Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Gm12820-201ENSMUST00000119233 342 ntBASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Gm13924-201ENSMUST00000119899 486 ntBASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Gm11742-201ENSMUST00000119903 233 ntBASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Gm13214-201ENSMUST00000122137 408 ntBASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Gm23546-201ENSMUST00000158211 137 ntBASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Gm22361-201ENSMUST00000158435 176 ntBASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Gm28097-201ENSMUST00000187333 366 ntBASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Gm43315-201ENSMUST00000198120 313 ntBASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 AC121137.1-201ENSMUST00000225272 602 ntBASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 AC154724.1-201ENSMUST00000225782 821 ntBASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upf3bQ3ULL6 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Gm13867-201ENSMUST00000120844 395 ntBASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Gm13132-201ENSMUST00000121194 472 ntBASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Gm14369-201ENSMUST00000121355 285 ntBASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Gm11759-201ENSMUST00000121742 464 ntBASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Gm8214-201ENSMUST00000172123 351 ntBASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Gm21959-201ENSMUST00000178439 452 ntBASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Gm42663-201ENSMUST00000199883 351 ntBASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Gm32536-201ENSMUST00000205209 445 ntBASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 AC134537.2-201ENSMUST00000217770 575 ntBASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Gm6906-201ENSMUST00000218014 569 ntBASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Gm7676-201ENSMUST00000084055 319 ntBASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Upf3bQ3ULL6 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Gm7312-201ENSMUST00000118798 469 ntBASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Gm13213-201ENSMUST00000119668 474 ntBASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Gm23069-201ENSMUST00000158240 311 ntBASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Scarna6-201ENSMUST00000158656 265 ntBASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Gm3531-201ENSMUST00000162698 489 ntBASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Gm44319-201ENSMUST00000196974 93 ntBASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Gm17775-201ENSMUST00000198542 258 ntBASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Gm8891-201ENSMUST00000198546 832 ntBASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Gm18850-201ENSMUST00000211578 388 ntBASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Upf3bQ3ULL6 Gm42615-201ENSMUST00000197704 1820 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms