Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sox9Q04887 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sox9Q04887 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sox9Q04887 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sox9Q04887 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sox9Q04887 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sox9Q04887 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sox9Q04887 Gm37193-201ENSMUST00000193087 513 ntBASIC6.04□□□□□ -1.44
Sox9Q04887 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sox9Q04887 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sox9Q04887 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sox9Q04887 Gm18410-201ENSMUST00000207199 577 ntBASIC6.04□□□□□ -1.44
Sox9Q04887 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC6.04□□□□□ -1.44
Sox9Q04887 AC139845.2-201ENSMUST00000227504 436 ntBASIC6.04□□□□□ -1.44
Sox9Q04887 AC154738.7-201ENSMUST00000228606 579 ntBASIC6.04□□□□□ -1.44
Sox9Q04887 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sox9Q04887 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Sox9Q04887 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sox9Q04887 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sox9Q04887 Gm25403-201ENSMUST00000082971 143 ntBASIC6.04□□□□□ -1.44
Sox9Q04887 Gm25004-201ENSMUST00000083811 161 ntBASIC6.04□□□□□ -1.44
Sox9Q04887 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sox9Q04887 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sox9Q04887 Gm45424-201ENSMUST00000210575 3300 ntBASIC6.04□□□□□ -1.44
Sox9Q04887 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sox9Q04887 Gm7739-201ENSMUST00000221131 1560 ntBASIC6.04□□□□□ -1.44
Sox9Q04887 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sox9Q04887 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sox9Q04887 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sox9Q04887 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sox9Q04887 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sox9Q04887 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC6.04□□□□□ -1.44
Sox9Q04887 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sox9Q04887 Gm44288-201ENSMUST00000205061 2795 ntBASIC6.04□□□□□ -1.44
Sox9Q04887 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Sox9Q04887 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC6.04□□□□□ -1.44
Sox9Q04887 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sox9Q04887 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.04□□□□□ -1.44
Sox9Q04887 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sox9Q04887 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox9Q04887 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sox9Q04887 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox9Q04887 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox9Q04887 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sox9Q04887 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sox9Q04887 Gm37181-201ENSMUST00000192513 1727 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 Gm37010-201ENSMUST00000194539 1704 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sox9Q04887 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sox9Q04887 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sox9Q04887 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sox9Q04887 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 Gm6806-201ENSMUST00000120092 1006 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 Gm12880-201ENSMUST00000120652 494 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 Gm11404-201ENSMUST00000120872 494 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sox9Q04887 Gm23327-201ENSMUST00000157420 78 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 Gm23046-201ENSMUST00000158369 284 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 Gm21999-201ENSMUST00000165985 387 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sox9Q04887 Gm27855-201ENSMUST00000184122 128 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 Gm27163-201ENSMUST00000184767 409 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC6.03□□□□□ -1.44
Sox9Q04887 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sox9Q04887 Gm37288-201ENSMUST00000193963 334 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 Gm18864-201ENSMUST00000194518 1051 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox9Q04887 Gm43018-201ENSMUST00000198075 1275 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 Gm17775-201ENSMUST00000198542 258 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 Gm42164-201ENSMUST00000198881 379 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC6.03□□□□□ -1.44
Sox9Q04887 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC6.03□□□□□ -1.44
Sox9Q04887 AL772265.1-201ENSMUST00000214379 305 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC6.03□□□□□ -1.44
Sox9Q04887 AC174776.1-201ENSMUST00000221509 405 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 AC211878.2-201ENSMUST00000222486 488 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 AC174776.2-201ENSMUST00000222561 405 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 AC140209.1-204ENSMUST00000226736 739 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sox9Q04887 Gm7204-201ENSMUST00000062591 600 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox9Q04887 Gm25135-201ENSMUST00000082648 143 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 Vaultrc5-201ENSMUST00000083211 143 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 n-R5s85-201ENSMUST00000083453 113 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
Sox9Q04887 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sox9Q04887 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC6.03□□□□□ -1.44
Sox9Q04887 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox9Q04887 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sox9Q04887 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox9Q04887 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox9Q04887 Gm44248-201ENSMUST00000203079 1549 ntBASIC6.03□□□□□ -1.44
Sox9Q04887 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC6.03□□□□□ -1.44
Sox9Q04887 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox9Q04887 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
Sox9Q04887 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms