Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm43456-201ENSMUST00000202519 457 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm44184-201ENSMUST00000204290 132 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC5.27□□□□□ -1.57
Col8a1Q00780 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col8a1Q00780 AC153961.2-201ENSMUST00000218877 164 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm2099-201ENSMUST00000220979 412 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 AC168056.2-201ENSMUST00000223591 269 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 CT573085.1-201ENSMUST00000224279 1197 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 Zfp429-203ENSMUST00000224684 524 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Col8a1Q00780 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Col8a1Q00780 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col8a1Q00780 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm25004-201ENSMUST00000083811 161 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm7731-201ENSMUST00000091759 470 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col8a1Q00780 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col8a1Q00780 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm14245-201ENSMUST00000118939 1843 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col8a1Q00780 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col8a1Q00780 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col8a1Q00780 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col8a1Q00780 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col8a1Q00780 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm19093-201ENSMUST00000210671 1454 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm4973-201ENSMUST00000206925 1334 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm43588-201ENSMUST00000201862 2298 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col8a1Q00780 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC5.26□□□□□ -1.57
Col8a1Q00780 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm13100-201ENSMUST00000117157 1439 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm24173-201ENSMUST00000104130 128 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm8692-201ENSMUST00000118102 438 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm11737-201ENSMUST00000118713 468 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm8855-201ENSMUST00000118888 878 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm15193-201ENSMUST00000120224 865 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm14515-201ENSMUST00000121327 216 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm14766-201ENSMUST00000121689 367 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm11787-201ENSMUST00000121996 1050 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm22434-201ENSMUST00000158549 122 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm8323-201ENSMUST00000168436 1201 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Mir5125-201ENSMUST00000175240 79 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm2871-201ENSMUST00000179984 1204 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm24969-201ENSMUST00000180331 79 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm25284-201ENSMUST00000180345 141 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm26993-201ENSMUST00000182766 789 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC5.26□□□□□ -1.57
Col8a1Q00780 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm42958-201ENSMUST00000197595 318 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm7832-201ENSMUST00000202613 880 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm8774-201ENSMUST00000203621 692 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm9237-201ENSMUST00000221499 548 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm10095-201ENSMUST00000222765 483 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 AC140288.1-201ENSMUST00000226329 503 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col8a1Q00780 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Col8a1Q00780 n-R5s204-201ENSMUST00000082972 119 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col8a1Q00780 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Col8a1Q00780 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm9408-201ENSMUST00000197375 1505 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm45819-201ENSMUST00000210940 1751 ntBASIC5.26□□□□□ -1.57
Col8a1Q00780 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
Col8a1Q00780 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col8a1Q00780 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col8a1Q00780 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC5.26□□□□□ -1.57
Col8a1Q00780 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC5.26□□□□□ -1.57
Col8a1Q00780 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC5.26□□□□□ -1.57
Col8a1Q00780 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col8a1Q00780 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC5.25□□□□□ -1.57
Col8a1Q00780 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col8a1Q00780 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col8a1Q00780 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 108 ms