Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm42619-201ENSMUST00000197564 1136 ntBASIC5.32□□□□□ -1.56
Tpm1P58771 Gm44559-201ENSMUST00000207177 1012 ntBASIC5.32□□□□□ -1.56
Tpm1P58771 Gm45789-201ENSMUST00000213038 364 ntBASIC5.32□□□□□ -1.56
Tpm1P58771 AC154450.1-201ENSMUST00000220911 485 ntBASIC5.32□□□□□ -1.56
Tpm1P58771 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.32□□□□□ -1.56
Tpm1P58771 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.32□□□□□ -1.56
Tpm1P58771 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Tpm1P58771 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Tpm1P58771 Gm42440-201ENSMUST00000197906 2284 ntBASIC5.32□□□□□ -1.56
Tpm1P58771 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC5.32□□□□□ -1.56
Tpm1P58771 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Tpm1P58771 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Tpm1P58771 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Tpm1P58771 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Tpm1P58771 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Tpm1P58771 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Tpm1P58771 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.31□□□□□ -1.56
Tpm1P58771 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Tpm1P58771 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Tpm1P58771 Gm16149-201ENSMUST00000117631 309 ntBASIC5.31□□□□□ -1.56
Tpm1P58771 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Tpm1P58771 Gm11790-201ENSMUST00000119569 455 ntBASIC5.31□□□□□ -1.56
Tpm1P58771 Gm13245-201ENSMUST00000119646 260 ntBASIC5.31□□□□□ -1.56
Tpm1P58771 Gm11448-201ENSMUST00000120427 450 ntBASIC5.31□□□□□ -1.56
Tpm1P58771 Gm13132-201ENSMUST00000121194 472 ntBASIC5.31□□□□□ -1.56
Tpm1P58771 Gm12005-201ENSMUST00000121451 379 ntBASIC5.31□□□□□ -1.56
Tpm1P58771 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC5.31□□□□□ -1.56
Tpm1P58771 Gm16102-201ENSMUST00000160955 420 ntBASIC5.31□□□□□ -1.56
Tpm1P58771 Gm22859-201ENSMUST00000174978 122 ntBASIC5.31□□□□□ -1.56
Tpm1P58771 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Tpm1P58771 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Tpm1P58771 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC5.31□□□□□ -1.56
Tpm1P58771 Gm38097-201ENSMUST00000192936 439 ntBASIC5.31□□□□□ -1.56
Tpm1P58771 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.31□□□□□ -1.56
Tpm1P58771 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Tpm1P58771 Gm44571-201ENSMUST00000208092 533 ntBASIC5.31□□□□□ -1.56
Tpm1P58771 Gm44648-201ENSMUST00000208267 329 ntBASIC5.31□□□□□ -1.56
Tpm1P58771 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.31□□□□□ -1.56
Tpm1P58771 Gm9202-201ENSMUST00000223036 437 ntBASIC5.31□□□□□ -1.56
Tpm1P58771 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Tpm1P58771 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Tpm1P58771 Gm10221-201ENSMUST00000088299 309 ntBASIC5.31□□□□□ -1.56
Tpm1P58771 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Tpm1P58771 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Tpm1P58771 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Tpm1P58771 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.31□□□□□ -1.56
Tpm1P58771 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.31□□□□□ -1.56
Tpm1P58771 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Tpm1P58771 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Tpm1P58771 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Tpm1P58771 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Tpm1P58771 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Tpm1P58771 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Tpm1P58771 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Tpm1P58771 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Tpm1P58771 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Tpm1P58771 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Tpm1P58771 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Tpm1P58771 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Tpm1P58771 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.3□□□□□ -1.56
Tpm1P58771 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Tpm1P58771 Gm14385-201ENSMUST00000116315 876 ntBASIC5.3□□□□□ -1.56
Tpm1P58771 Gm12768-201ENSMUST00000120055 759 ntBASIC5.3□□□□□ -1.56
Tpm1P58771 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Tpm1P58771 Gm7316-201ENSMUST00000165395 445 ntBASIC5.3□□□□□ -1.56
Tpm1P58771 Gm37421-201ENSMUST00000193088 132 ntBASIC5.3□□□□□ -1.56
Tpm1P58771 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC5.3□□□□□ -1.56
Tpm1P58771 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC5.3□□□□□ -1.56
Tpm1P58771 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Tpm1P58771 Gm32453-201ENSMUST00000204183 456 ntBASIC5.3□□□□□ -1.56
Tpm1P58771 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.3□□□□□ -1.56
Tpm1P58771 Gm19170-201ENSMUST00000212440 1084 ntBASIC5.3□□□□□ -1.56
Tpm1P58771 Gm45777-201ENSMUST00000213009 301 ntBASIC5.3□□□□□ -1.56
Tpm1P58771 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.3□□□□□ -1.56
Tpm1P58771 AC123064.2-201ENSMUST00000217758 193 ntBASIC5.3□□□□□ -1.56
Tpm1P58771 AC165283.1-201ENSMUST00000223390 307 ntBASIC5.3□□□□□ -1.56
Tpm1P58771 Thoc7-209ENSMUST00000225325 765 ntBASIC5.3□□□□□ -1.56
Tpm1P58771 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
Tpm1P58771 Gm6065-201ENSMUST00000081336 492 ntBASIC5.3□□□□□ -1.56
Tpm1P58771 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Tpm1P58771 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Tpm1P58771 Fus-202ENSMUST00000079045 2623 ntBASIC5.3□□□□□ -1.56
Tpm1P58771 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC5.3□□□□□ -1.56
Tpm1P58771 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Tpm1P58771 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC5.3□□□□□ -1.56
Tpm1P58771 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Tpm1P58771 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Tpm1P58771 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Tpm1P58771 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
Tpm1P58771 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Tpm1P58771 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Tpm1P58771 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Tpm1P58771 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Tpm1P58771 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Tpm1P58771 Gm43010-201ENSMUST00000195993 2878 ntBASIC5.29□□□□□ -1.56
Tpm1P58771 Gm13712-201ENSMUST00000117484 2295 ntBASIC5.29□□□□□ -1.56
Tpm1P58771 Gm36931-201ENSMUST00000192997 4801 ntBASIC5.29□□□□□ -1.56
Tpm1P58771 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC5.29□□□□□ -1.56
Tpm1P58771 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Tpm1P58771 Gm11912-201ENSMUST00000117235 264 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms