Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC5.43□□□□□ -1.54
NcanP55066 Gm27193-201ENSMUST00000184217 586 ntBASIC5.43□□□□□ -1.54
NcanP55066 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC5.43□□□□□ -1.54
NcanP55066 Gm28957-201ENSMUST00000190174 373 ntBASIC5.43□□□□□ -1.54
NcanP55066 Gm37632-201ENSMUST00000191811 1142 ntBASIC5.43□□□□□ -1.54
NcanP55066 Gm37319-201ENSMUST00000193500 636 ntBASIC5.43□□□□□ -1.54
NcanP55066 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC5.43□□□□□ -1.54
NcanP55066 Gm43580-201ENSMUST00000202892 284 ntBASIC5.43□□□□□ -1.54
NcanP55066 Gm44412-201ENSMUST00000203018 294 ntBASIC5.43□□□□□ -1.54
NcanP55066 Gm5027-201ENSMUST00000206700 375 ntBASIC5.43□□□□□ -1.54
NcanP55066 Gm33626-201ENSMUST00000206790 828 ntBASIC5.43□□□□□ -1.54
NcanP55066 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
NcanP55066 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC5.43□□□□□ -1.54
NcanP55066 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
NcanP55066 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
NcanP55066 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
NcanP55066 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
NcanP55066 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
NcanP55066 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NcanP55066 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
NcanP55066 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NcanP55066 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC5.43□□□□□ -1.54
NcanP55066 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.43□□□□□ -1.54
NcanP55066 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NcanP55066 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NcanP55066 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.43□□□□□ -1.54
NcanP55066 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.43□□□□□ -1.54
NcanP55066 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.43□□□□□ -1.54
NcanP55066 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NcanP55066 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NcanP55066 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.43□□□□□ -1.54
NcanP55066 Gm37079-201ENSMUST00000194114 2135 ntBASIC5.42□□□□□ -1.54
NcanP55066 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
NcanP55066 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NcanP55066 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NcanP55066 Smc5-206ENSMUST00000226111 3265 ntBASIC5.42□□□□□ -1.54
NcanP55066 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.42□□□□□ -1.54
NcanP55066 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
NcanP55066 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NcanP55066 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
NcanP55066 Gm3931-201ENSMUST00000119038 455 ntBASIC5.42□□□□□ -1.54
NcanP55066 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NcanP55066 Gm12693-201ENSMUST00000121965 483 ntBASIC5.42□□□□□ -1.54
NcanP55066 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC5.42□□□□□ -1.54
NcanP55066 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
NcanP55066 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC5.42□□□□□ -1.54
NcanP55066 Gm27762-201ENSMUST00000183417 109 ntBASIC5.42□□□□□ -1.54
NcanP55066 Gm27528-201ENSMUST00000183544 205 ntBASIC5.42□□□□□ -1.54
NcanP55066 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NcanP55066 Mir7050-201ENSMUST00000184636 60 ntBASIC5.42□□□□□ -1.54
NcanP55066 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NcanP55066 Gm37884-201ENSMUST00000191857 818 ntBASIC5.42□□□□□ -1.54
NcanP55066 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.42□□□□□ -1.54
NcanP55066 Gm8823-201ENSMUST00000193158 433 ntBASIC5.42□□□□□ -1.54
NcanP55066 Gm8023-201ENSMUST00000195298 903 ntBASIC5.42□□□□□ -1.54
NcanP55066 Gm19080-201ENSMUST00000196082 550 ntBASIC5.42□□□□□ -1.54
NcanP55066 Igkv8-31-201ENSMUST00000200040 372 ntBASIC5.42□□□□□ -1.54
NcanP55066 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.42□□□□□ -1.54
NcanP55066 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.42□□□□□ -1.54
NcanP55066 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC5.42□□□□□ -1.54
NcanP55066 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NcanP55066 AC162183.1-202ENSMUST00000225434 904 ntBASIC5.42□□□□□ -1.54
NcanP55066 AC164597.1-201ENSMUST00000226538 514 ntBASIC5.42□□□□□ -1.54
NcanP55066 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NcanP55066 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NcanP55066 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NcanP55066 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.42□□□□□ -1.54
NcanP55066 Gm23686-201ENSMUST00000083241 164 ntBASIC5.42□□□□□ -1.54
NcanP55066 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NcanP55066 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.42□□□□□ -1.54
NcanP55066 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NcanP55066 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
NcanP55066 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.42□□□□□ -1.54
NcanP55066 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
NcanP55066 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
NcanP55066 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NcanP55066 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
NcanP55066 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
NcanP55066 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
NcanP55066 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
NcanP55066 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
NcanP55066 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
NcanP55066 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
NcanP55066 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC5.41□□□□□ -1.54
NcanP55066 AC154329.1-201ENSMUST00000224408 3129 ntBASIC5.41□□□□□ -1.54
NcanP55066 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NcanP55066 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.41□□□□□ -1.54
NcanP55066 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NcanP55066 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NcanP55066 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NcanP55066 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
NcanP55066 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.41□□□□□ -1.54
NcanP55066 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
NcanP55066 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.41□□□□□ -1.54
NcanP55066 Mir546-201ENSMUST00000102105 121 ntBASIC5.41□□□□□ -1.54
NcanP55066 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
NcanP55066 Gm23178-201ENSMUST00000116782 95 ntBASIC5.41□□□□□ -1.54
NcanP55066 Gm15752-201ENSMUST00000117427 394 ntBASIC5.41□□□□□ -1.54
NcanP55066 Gm8202-201ENSMUST00000117682 310 ntBASIC5.41□□□□□ -1.54
NcanP55066 Gm11679-201ENSMUST00000121830 779 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms