Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm24220-201ENSMUST00000177753 79 ntBASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm25988-201ENSMUST00000177759 79 ntBASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm23471-201ENSMUST00000177886 79 ntBASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm26488-201ENSMUST00000178225 79 ntBASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm23449-201ENSMUST00000179208 79 ntBASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm25221-201ENSMUST00000180051 79 ntBASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm18828-202ENSMUST00000181035 310 ntBASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Nkx2-1P50220 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Mrgpra14-201ENSMUST00000189782 913 ntBASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm28766-201ENSMUST00000191086 234 ntBASIC4.24□□□□□ -1.73
Nkx2-1P50220 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm18717-201ENSMUST00000192744 1241 ntBASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm43078-201ENSMUST00000197222 168 ntBASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm42593-201ENSMUST00000198469 377 ntBASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm43478-201ENSMUST00000200381 292 ntBASIC4.24□□□□□ -1.73
Nkx2-1P50220 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC4.24□□□□□ -1.73
Nkx2-1P50220 AC153548.2-201ENSMUST00000219770 885 ntBASIC4.24□□□□□ -1.73
Nkx2-1P50220 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 AC154556.1-201ENSMUST00000224587 885 ntBASIC4.24□□□□□ -1.73
Nkx2-1P50220 AC121978.1-201ENSMUST00000228357 380 ntBASIC4.24□□□□□ -1.73
Nkx2-1P50220 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC4.24□□□□□ -1.73
Nkx2-1P50220 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Nkx2-1P50220 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Nkx2-1P50220 Gm43216-201ENSMUST00000196295 1333 ntBASIC4.23□□□□□ -1.73
Nkx2-1P50220 Gm44897-201ENSMUST00000206187 1341 ntBASIC4.23□□□□□ -1.73
Nkx2-1P50220 Gm45149-201ENSMUST00000206459 2172 ntBASIC4.23□□□□□ -1.73
Nkx2-1P50220 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Nkx2-1P50220 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Nkx2-1P50220 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Nkx2-1P50220 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.23□□□□□ -1.73
Nkx2-1P50220 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Nkx2-1P50220 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.23□□□□□ -1.73
Nkx2-1P50220 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC4.23□□□□□ -1.73
Nkx2-1P50220 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Nkx2-1P50220 Gm13321-201ENSMUST00000117101 400 ntBASIC4.23□□□□□ -1.73
Nkx2-1P50220 Gm14163-201ENSMUST00000117342 217 ntBASIC4.23□□□□□ -1.73
Nkx2-1P50220 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.23□□□□□ -1.73
Nkx2-1P50220 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC4.23□□□□□ -1.73
Nkx2-1P50220 Gm8129-201ENSMUST00000118230 213 ntBASIC4.23□□□□□ -1.73
Nkx2-1P50220 Gm12717-201ENSMUST00000118427 983 ntBASIC4.23□□□□□ -1.73
Nkx2-1P50220 Gm13359-201ENSMUST00000119000 695 ntBASIC4.23□□□□□ -1.73
Nkx2-1P50220 Gm15044-201ENSMUST00000120703 598 ntBASIC4.23□□□□□ -1.73
Nkx2-1P50220 Gm12267-201ENSMUST00000121609 761 ntBASIC4.23□□□□□ -1.73
Nkx2-1P50220 Gm14589-201ENSMUST00000121640 727 ntBASIC4.23□□□□□ -1.73
Nkx2-1P50220 Gm23669-201ENSMUST00000157470 128 ntBASIC4.23□□□□□ -1.73
Nkx2-1P50220 Gm23318-201ENSMUST00000158000 108 ntBASIC4.23□□□□□ -1.73
Nkx2-1P50220 Gm26404-201ENSMUST00000158498 109 ntBASIC4.23□□□□□ -1.73
Nkx2-1P50220 Gm25445-201ENSMUST00000158996 299 ntBASIC4.23□□□□□ -1.73
Nkx2-1P50220 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.23□□□□□ -1.73
Nkx2-1P50220 Gm27024-201ENSMUST00000182561 755 ntBASIC4.23□□□□□ -1.73
Nkx2-1P50220 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC4.23□□□□□ -1.73
Nkx2-1P50220 Gm27688-201ENSMUST00000183634 91 ntBASIC4.23□□□□□ -1.73
Nkx2-1P50220 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC4.23□□□□□ -1.73
Nkx2-1P50220 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.23□□□□□ -1.73
Nkx2-1P50220 Gm29534-201ENSMUST00000187328 382 ntBASIC4.23□□□□□ -1.73
Nkx2-1P50220 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms