Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Usp4P35123 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC6.02□□□□□ -1.45
Usp4P35123 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC6.02□□□□□ -1.45
Usp4P35123 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Usp4P35123 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Usp4P35123 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Usp4P35123 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Usp4P35123 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC6.02□□□□□ -1.45
Usp4P35123 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Usp4P35123 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC6.02□□□□□ -1.45
Usp4P35123 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Usp4P35123 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC6.02□□□□□ -1.45
Usp4P35123 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Usp4P35123 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC6.02□□□□□ -1.45
Usp4P35123 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Usp4P35123 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC6.02□□□□□ -1.45
Usp4P35123 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC6.02□□□□□ -1.45
Usp4P35123 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Usp4P35123 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Usp4P35123 Gm7739-201ENSMUST00000221131 1560 ntBASIC6.01□□□□□ -1.45
Usp4P35123 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Usp4P35123 AC158388.2-201ENSMUST00000223665 1314 ntBASIC6.01□□□□□ -1.45
Usp4P35123 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Usp4P35123 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.01□□□□□ -1.45
Usp4P35123 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Usp4P35123 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Usp4P35123 Mir700-201ENSMUST00000102169 79 ntBASIC6.01□□□□□ -1.45
Usp4P35123 Gm26300-201ENSMUST00000102282 94 ntBASIC6.01□□□□□ -1.45
Usp4P35123 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC6.01□□□□□ -1.45
Usp4P35123 Mir190b-201ENSMUST00000104803 80 ntBASIC6.01□□□□□ -1.45
Usp4P35123 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Usp4P35123 Gm12131-201ENSMUST00000117479 359 ntBASIC6.01□□□□□ -1.45
Usp4P35123 Gm12520-201ENSMUST00000117493 316 ntBASIC6.01□□□□□ -1.45
Usp4P35123 Gm15078-201ENSMUST00000118371 782 ntBASIC6.01□□□□□ -1.45
Usp4P35123 Gm14842-201ENSMUST00000119577 269 ntBASIC6.01□□□□□ -1.45
Usp4P35123 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC6.01□□□□□ -1.45
Usp4P35123 Gm11852-201ENSMUST00000120806 222 ntBASIC6.01□□□□□ -1.45
Usp4P35123 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC6.01□□□□□ -1.45
Usp4P35123 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC6.01□□□□□ -1.45
Usp4P35123 Calr-ps-201ENSMUST00000121776 485 ntBASIC6.01□□□□□ -1.45
Usp4P35123 Gm13471-201ENSMUST00000122057 433 ntBASIC6.01□□□□□ -1.45
Usp4P35123 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC6.01□□□□□ -1.45
Usp4P35123 Gm25979-201ENSMUST00000157177 138 ntBASIC6.01□□□□□ -1.45
Usp4P35123 Gm22599-201ENSMUST00000157597 132 ntBASIC6.01□□□□□ -1.45
Usp4P35123 Mir6971-201ENSMUST00000183497 63 ntBASIC6.01□□□□□ -1.45
Usp4P35123 Gm27522-201ENSMUST00000183949 230 ntBASIC6.01□□□□□ -1.45
Usp4P35123 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC6.01□□□□□ -1.45
Usp4P35123 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Usp4P35123 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC6.01□□□□□ -1.45
Usp4P35123 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Usp4P35123 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Usp4P35123 Gm19224-201ENSMUST00000190477 793 ntBASIC6.01□□□□□ -1.45
Usp4P35123 Mir6906-201ENSMUST00000198998 58 ntBASIC6.01□□□□□ -1.45
Usp4P35123 Gm44219-201ENSMUST00000203005 273 ntBASIC6.01□□□□□ -1.45
Usp4P35123 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC6.01□□□□□ -1.45
Usp4P35123 Gm29817-201ENSMUST00000210098 172 ntBASIC6.01□□□□□ -1.45
Usp4P35123 Gm4510-201ENSMUST00000218265 427 ntBASIC6.01□□□□□ -1.45
Usp4P35123 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC6.01□□□□□ -1.45
Usp4P35123 Gm18592-201ENSMUST00000221529 276 ntBASIC6.01□□□□□ -1.45
Usp4P35123 AC121947.1-201ENSMUST00000221755 1145 ntBASIC6.01□□□□□ -1.45
Usp4P35123 Gm10095-201ENSMUST00000222765 483 ntBASIC6.01□□□□□ -1.45
Usp4P35123 CT010480.5-201ENSMUST00000225026 217 ntBASIC6.01□□□□□ -1.45
Usp4P35123 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Usp4P35123 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Usp4P35123 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Usp4P35123 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Usp4P35123 Gm19125-201ENSMUST00000188408 1383 ntBASIC6.01□□□□□ -1.45
Usp4P35123 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Usp4P35123 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Usp4P35123 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Usp4P35123 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Usp4P35123 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Usp4P35123 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Usp4P35123 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Usp4P35123 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Usp4P35123 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC6□□□□□ -1.45
Usp4P35123 Gm44209-201ENSMUST00000204556 4153 ntBASIC6□□□□□ -1.45
Usp4P35123 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Usp4P35123 Gm36936-201ENSMUST00000194508 2749 ntBASIC6□□□□□ -1.45
Usp4P35123 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Usp4P35123 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC6□□□□□ -1.45
Usp4P35123 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Usp4P35123 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC6□□□□□ -1.45
Usp4P35123 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Usp4P35123 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
Usp4P35123 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC6□□□□□ -1.45
Usp4P35123 Gm20486-201ENSMUST00000101544 128 ntBASIC6□□□□□ -1.45
Usp4P35123 Gm25345-201ENSMUST00000104505 133 ntBASIC6□□□□□ -1.45
Usp4P35123 Gm15854-201ENSMUST00000118879 808 ntBASIC6□□□□□ -1.45
Usp4P35123 Gm11533-201ENSMUST00000120287 477 ntBASIC6□□□□□ -1.45
Usp4P35123 Mup-ps28-201ENSMUST00000120686 289 ntBASIC6□□□□□ -1.45
Usp4P35123 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC6□□□□□ -1.45
Usp4P35123 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC6□□□□□ -1.45
Usp4P35123 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC6□□□□□ -1.45
Usp4P35123 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC6□□□□□ -1.45
Usp4P35123 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC6□□□□□ -1.45
Usp4P35123 Gm15790-201ENSMUST00000161109 1251 ntBASIC6□□□□□ -1.45
Usp4P35123 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Usp4P35123 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC6□□□□□ -1.45
Usp4P35123 Gm25065-201ENSMUST00000177914 132 ntBASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms