Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Lima1Q9ERG0 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm12760-201ENSMUST00000117861 482 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm15357-201ENSMUST00000119160 285 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm14046-201ENSMUST00000119389 509 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm22895-201ENSMUST00000157508 308 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm25433-201ENSMUST00000158283 286 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm10319-202ENSMUST00000159439 846 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm28017-201ENSMUST00000183434 126 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Mrgprb13-201ENSMUST00000188191 985 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm18426-201ENSMUST00000191874 973 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm36998-201ENSMUST00000193205 704 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm37070-201ENSMUST00000193272 460 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Ighv1-35-201ENSMUST00000195265 351 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm5284-201ENSMUST00000199053 903 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm7721-201ENSMUST00000200446 546 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm43945-201ENSMUST00000203595 754 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC4.77□□□□□ -1.65
Lima1Q9ERG0 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm3086-202ENSMUST00000221248 310 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 AC154806.4-201ENSMUST00000227406 439 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm16415-201ENSMUST00000080097 489 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm10916-201ENSMUST00000080330 483 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 n-R5s170-201ENSMUST00000083726 113 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm42440-201ENSMUST00000197906 2284 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm45885-202ENSMUST00000211520 1383 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm2987-201ENSMUST00000187673 1693 ntBASIC4.77□□□□□ -1.65
Lima1Q9ERG0 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Gm29084-201ENSMUST00000185587 1452 ntBASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Gm16149-201ENSMUST00000117631 309 ntBASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Gm11893-201ENSMUST00000117829 491 ntBASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Gm6305-201ENSMUST00000121027 1012 ntBASIC4.76□□□□□ -1.65
Lima1Q9ERG0 n-R5s24-201ENSMUST00000122518 117 ntBASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC4.76□□□□□ -1.65
Lima1Q9ERG0 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Mir7674-201ENSMUST00000184964 63 ntBASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Gm6075-201ENSMUST00000186816 486 ntBASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Gm28468-201ENSMUST00000188536 615 ntBASIC4.76□□□□□ -1.65
Lima1Q9ERG0 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lima1Q9ERG0 AC138284.2-201ENSMUST00000213982 567 ntBASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Lima1Q9ERG0 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Gm18904-201ENSMUST00000218756 329 ntBASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC4.76□□□□□ -1.65
Lima1Q9ERG0 AC159622.1-201ENSMUST00000221004 554 ntBASIC4.76□□□□□ -1.65
Lima1Q9ERG0 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Gm9269-201ENSMUST00000221661 578 ntBASIC4.76□□□□□ -1.65
Lima1Q9ERG0 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.76□□□□□ -1.65
Lima1Q9ERG0 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lima1Q9ERG0 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Gm22155-201ENSMUST00000083836 162 ntBASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Gm25187-201ENSMUST00000083906 133 ntBASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lima1Q9ERG0 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.76□□□□□ -1.65
Lima1Q9ERG0 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Gm22273-201ENSMUST00000104040 132 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 112.5 ms