Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Ube2nl-201ENSMUST00000085228 456 ntBASIC6.73□□□□□ -1.33
U2af1Q9D883 Gm42600-201ENSMUST00000202081 3588 ntBASIC6.73□□□□□ -1.33
U2af1Q9D883 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
U2af1Q9D883 Gm37303-201ENSMUST00000194202 1559 ntBASIC6.73□□□□□ -1.33
U2af1Q9D883 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
U2af1Q9D883 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
U2af1Q9D883 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
U2af1Q9D883 AC159193.1-201ENSMUST00000222872 2517 ntBASIC6.73□□□□□ -1.33
U2af1Q9D883 Gm37780-201ENSMUST00000194117 1873 ntBASIC6.73□□□□□ -1.33
U2af1Q9D883 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
U2af1Q9D883 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
U2af1Q9D883 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC6.72□□□□□ -1.33
U2af1Q9D883 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
U2af1Q9D883 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
U2af1Q9D883 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
U2af1Q9D883 Gm14046-201ENSMUST00000119389 509 ntBASIC6.72□□□□□ -1.33
U2af1Q9D883 n-R5s21-201ENSMUST00000122692 117 ntBASIC6.72□□□□□ -1.33
U2af1Q9D883 Gm25293-201ENSMUST00000122792 285 ntBASIC6.72□□□□□ -1.33
U2af1Q9D883 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC6.72□□□□□ -1.33
U2af1Q9D883 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC6.72□□□□□ -1.33
U2af1Q9D883 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC6.72□□□□□ -1.33
U2af1Q9D883 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
U2af1Q9D883 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC6.72□□□□□ -1.33
U2af1Q9D883 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC6.72□□□□□ -1.33
U2af1Q9D883 Gm25839-201ENSMUST00000158921 103 ntBASIC6.72□□□□□ -1.33
U2af1Q9D883 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC6.72□□□□□ -1.33
U2af1Q9D883 Gm18117-201ENSMUST00000187720 742 ntBASIC6.72□□□□□ -1.33
U2af1Q9D883 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC6.72□□□□□ -1.33
U2af1Q9D883 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC6.72□□□□□ -1.33
U2af1Q9D883 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC6.72□□□□□ -1.33
U2af1Q9D883 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC6.72□□□□□ -1.33
U2af1Q9D883 AC153729.4-201ENSMUST00000217582 3826 ntBASIC6.72□□□□□ -1.33
U2af1Q9D883 Gm8672-201ENSMUST00000221200 332 ntBASIC6.72□□□□□ -1.33
U2af1Q9D883 AC154305.3-201ENSMUST00000224661 552 ntBASIC6.72□□□□□ -1.33
U2af1Q9D883 AC164618.1-201ENSMUST00000225769 592 ntBASIC6.72□□□□□ -1.33
U2af1Q9D883 Anxa13-202ENSMUST00000227274 1201 ntBASIC6.72□□□□□ -1.33
U2af1Q9D883 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
U2af1Q9D883 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
U2af1Q9D883 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
U2af1Q9D883 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
U2af1Q9D883 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC6.72□□□□□ -1.33
U2af1Q9D883 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
U2af1Q9D883 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
U2af1Q9D883 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
U2af1Q9D883 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.71□□□□□ -1.33
U2af1Q9D883 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
U2af1Q9D883 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC6.71□□□□□ -1.33
U2af1Q9D883 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
U2af1Q9D883 Gm37569-201ENSMUST00000192111 1722 ntBASIC6.71□□□□□ -1.34
U2af1Q9D883 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
U2af1Q9D883 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
U2af1Q9D883 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
U2af1Q9D883 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
U2af1Q9D883 Gm15161-201ENSMUST00000117340 387 ntBASIC6.71□□□□□ -1.34
U2af1Q9D883 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC6.71□□□□□ -1.34
U2af1Q9D883 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC6.71□□□□□ -1.34
U2af1Q9D883 Gm3267-201ENSMUST00000118671 473 ntBASIC6.71□□□□□ -1.34
U2af1Q9D883 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
U2af1Q9D883 Gm25271-201ENSMUST00000157273 290 ntBASIC6.71□□□□□ -1.34
U2af1Q9D883 Gm16125-201ENSMUST00000159003 339 ntBASIC6.71□□□□□ -1.34
U2af1Q9D883 Atp2b4-208ENSMUST00000167348 243 ntBASIC6.71□□□□□ -1.34
U2af1Q9D883 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
U2af1Q9D883 Mir6398-201ENSMUST00000184541 102 ntBASIC6.71□□□□□ -1.34
U2af1Q9D883 Trbv28-201ENSMUST00000192804 264 ntBASIC6.71□□□□□ -1.34
U2af1Q9D883 Gm38011-201ENSMUST00000193312 279 ntBASIC6.71□□□□□ -1.34
U2af1Q9D883 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC6.71□□□□□ -1.34
U2af1Q9D883 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
U2af1Q9D883 Gm3148-201ENSMUST00000203594 612 ntBASIC6.71□□□□□ -1.34
U2af1Q9D883 Gm19065-202ENSMUST00000203910 1165 ntBASIC6.71□□□□□ -1.34
U2af1Q9D883 Gm45269-201ENSMUST00000210359 282 ntBASIC6.71□□□□□ -1.34
U2af1Q9D883 Gm17999-201ENSMUST00000211568 542 ntBASIC6.71□□□□□ -1.34
U2af1Q9D883 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC6.71□□□□□ -1.34
U2af1Q9D883 AC153801.1-201ENSMUST00000217904 947 ntBASIC6.71□□□□□ -1.34
U2af1Q9D883 AC153961.2-201ENSMUST00000218877 164 ntBASIC6.71□□□□□ -1.34
U2af1Q9D883 AC131743.3-201ENSMUST00000222099 662 ntBASIC6.71□□□□□ -1.34
U2af1Q9D883 Gm9512-201ENSMUST00000223112 497 ntBASIC6.71□□□□□ -1.34
U2af1Q9D883 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC6.71□□□□□ -1.34
U2af1Q9D883 Gm26330-201ENSMUST00000082817 104 ntBASIC6.71□□□□□ -1.34
U2af1Q9D883 Mir27a-201ENSMUST00000083510 87 ntBASIC6.71□□□□□ -1.34
U2af1Q9D883 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.34
U2af1Q9D883 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
U2af1Q9D883 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
U2af1Q9D883 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
U2af1Q9D883 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC6.7□□□□□ -1.34
U2af1Q9D883 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
U2af1Q9D883 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
U2af1Q9D883 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
U2af1Q9D883 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
U2af1Q9D883 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
U2af1Q9D883 Gm9700-201ENSMUST00000193786 1617 ntBASIC6.7□□□□□ -1.34
U2af1Q9D883 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
U2af1Q9D883 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
U2af1Q9D883 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
U2af1Q9D883 Gm12073-201ENSMUST00000117382 524 ntBASIC6.7□□□□□ -1.34
U2af1Q9D883 Gm14560-201ENSMUST00000118672 375 ntBASIC6.7□□□□□ -1.34
U2af1Q9D883 Gm14563-201ENSMUST00000120571 354 ntBASIC6.7□□□□□ -1.34
U2af1Q9D883 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
U2af1Q9D883 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC6.7□□□□□ -1.34
U2af1Q9D883 Gm23327-201ENSMUST00000157420 78 ntBASIC6.7□□□□□ -1.34
U2af1Q9D883 Gm26487-201ENSMUST00000158022 94 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms