Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm10727-201ENSMUST00000197107 1602 ntBASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Gm11821-201ENSMUST00000117335 979 ntBASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Gm11781-201ENSMUST00000118328 472 ntBASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Gm13245-201ENSMUST00000119646 260 ntBASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC3.86□□□□□ -1.79
Nup35Q8R4R6 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Gm11197-201ENSMUST00000145158 839 ntBASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Gm23496-201ENSMUST00000157741 248 ntBASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Gm24636-201ENSMUST00000158673 288 ntBASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Gm5258-201ENSMUST00000165437 327 ntBASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Gm10292-202ENSMUST00000193165 585 ntBASIC3.86□□□□□ -1.79
Nup35Q8R4R6 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Nup35Q8R4R6 AC133189.1-201ENSMUST00000198820 140 ntBASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Gm43276-201ENSMUST00000199712 364 ntBASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Gm18468-201ENSMUST00000207321 369 ntBASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Gm18470-201ENSMUST00000207467 420 ntBASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Gm18465-201ENSMUST00000207468 369 ntBASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Gm18464-201ENSMUST00000207803 420 ntBASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Gm18458-201ENSMUST00000207908 369 ntBASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Gm18461-201ENSMUST00000208421 420 ntBASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC3.86□□□□□ -1.79
Nup35Q8R4R6 AC151971.3-201ENSMUST00000214694 404 ntBASIC3.86□□□□□ -1.79
Nup35Q8R4R6 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC3.86□□□□□ -1.79
Nup35Q8R4R6 AC134917.2-201ENSMUST00000223354 124 ntBASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Nup35Q8R4R6 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
Nup35Q8R4R6 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Fus-202ENSMUST00000079045 2623 ntBASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Gm13250-201ENSMUST00000117209 753 ntBASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Gm14957-201ENSMUST00000121069 817 ntBASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC3.85□□□□□ -1.79
Nup35Q8R4R6 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Gm22725-201ENSMUST00000158092 110 ntBASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Gm24675-201ENSMUST00000158757 259 ntBASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Mrgpra14-201ENSMUST00000189782 913 ntBASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Gm34176-201ENSMUST00000192621 474 ntBASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Gm2522-201ENSMUST00000204280 322 ntBASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 AC166358.9-201ENSMUST00000220653 375 ntBASIC3.85□□□□□ -1.79
Nup35Q8R4R6 AC116596.2-203ENSMUST00000227345 731 ntBASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 n-R5s46-201ENSMUST00000083960 116 ntBASIC3.85□□□□□ -1.79
Nup35Q8R4R6 n-R5s27-201ENSMUST00000093699 119 ntBASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Gm37217-201ENSMUST00000194017 3521 ntBASIC3.85□□□□□ -1.79
Nup35Q8R4R6 AC122408.2-201ENSMUST00000217901 1391 ntBASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
Nup35Q8R4R6 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC3.84□□□□□ -1.79
Nup35Q8R4R6 AC139754.3-201ENSMUST00000220444 1627 ntBASIC3.84□□□□□ -1.79
Nup35Q8R4R6 AC187103.2-201ENSMUST00000223605 1617 ntBASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Gm43784-201ENSMUST00000202922 2436 ntBASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms