Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm23093-201ENSMUST00000083450 102 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm38124-201ENSMUST00000191710 2581 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm37206-201ENSMUST00000195512 3069 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm42661-201ENSMUST00000202364 1442 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm42561-201ENSMUST00000202563 1442 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 AC158605.3-201ENSMUST00000218999 2538 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 AC161884.1-201ENSMUST00000225436 2174 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Gm37056-201ENSMUST00000192141 1865 ntBASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Gm37347-201ENSMUST00000193969 3071 ntBASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Gm25346-201ENSMUST00000104509 128 ntBASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Gm11462-201ENSMUST00000117749 562 ntBASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Gm11256-201ENSMUST00000118109 829 ntBASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Gm12985-201ENSMUST00000118376 183 ntBASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Gm15333-201ENSMUST00000118825 364 ntBASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Gm15113-201ENSMUST00000119280 836 ntBASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Gm13603-201ENSMUST00000119404 83 ntBASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Gm15034-201ENSMUST00000120043 349 ntBASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Gm12095-201ENSMUST00000121962 816 ntBASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Mup-ps2-201ENSMUST00000142602 533 ntBASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Gm11545-201ENSMUST00000146507 375 ntBASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Gm4487-201ENSMUST00000150617 442 ntBASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Ear-ps12-201ENSMUST00000161720 451 ntBASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Mir6337-201ENSMUST00000184194 105 ntBASIC7.17□□□□□ -1.26
Trim47Q8C0E3 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Gm37135-201ENSMUST00000192652 534 ntBASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Gm43440-201ENSMUST00000201957 729 ntBASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC7.17□□□□□ -1.26
Trim47Q8C0E3 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 AC156576.2-202ENSMUST00000222525 411 ntBASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 AC113031.1-201ENSMUST00000227400 432 ntBASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Gm45322-201ENSMUST00000211642 1361 ntBASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Gm43092-201ENSMUST00000202986 1854 ntBASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 AC144772.2-201ENSMUST00000228830 2859 ntBASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim47Q8C0E3 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Gm2987-201ENSMUST00000187673 1693 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 n-R5s178-201ENSMUST00000104249 114 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Gm11352-201ENSMUST00000119264 517 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Gm11498-201ENSMUST00000120660 949 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Gm16179-201ENSMUST00000120685 373 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Mir1960-201ENSMUST00000157488 78 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Gm24192-201ENSMUST00000157978 145 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Gm10177-201ENSMUST00000160052 444 ntBASIC7.16□□□□□ -1.26
Trim47Q8C0E3 Gm9071-201ENSMUST00000165915 474 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms