Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Egf-209ENSMUST00000199615 3211 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Trim35Q8C006 4921517D22Rik-201ENSMUST00000061597 3149 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim35Q8C006 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim35Q8C006 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim35Q8C006 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim35Q8C006 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Trim35Q8C006 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim35Q8C006 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC8.15□□□□□ -1.11
Trim35Q8C006 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Trim35Q8C006 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Trim35Q8C006 Atxn3-201ENSMUST00000021606 5363 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim35Q8C006 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC8.15□□□□□ -1.11
Trim35Q8C006 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Trim35Q8C006 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim35Q8C006 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC8.15□□□□□ -1.11
Trim35Q8C006 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC8.14□□□□□ -1.11
Trim35Q8C006 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim35Q8C006 6330549D23Rik-203ENSMUST00000160818 3228 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim35Q8C006 Limch1-203ENSMUST00000117601 3157 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim35Q8C006 Gm26920-201ENSMUST00000182746 2374 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
Trim35Q8C006 Mageb2-202ENSMUST00000201779 1551 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim35Q8C006 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim35Q8C006 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Trim35Q8C006 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim35Q8C006 Gm42679-201ENSMUST00000197086 2906 ntBASIC8.14□□□□□ -1.11
Trim35Q8C006 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim35Q8C006 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim35Q8C006 Gm45537-201ENSMUST00000211539 2708 ntBASIC8.14□□□□□ -1.11
Trim35Q8C006 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim35Q8C006 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Trim35Q8C006 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Trim35Q8C006 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Trim35Q8C006 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Trim35Q8C006 Gm25762-201ENSMUST00000103984 132 ntBASIC8.14□□□□□ -1.11
Trim35Q8C006 Gm25502-201ENSMUST00000104428 131 ntBASIC8.14□□□□□ -1.11
Trim35Q8C006 Gm13682-201ENSMUST00000117524 702 ntBASIC8.14□□□□□ -1.11
Trim35Q8C006 Gm15538-201ENSMUST00000121410 313 ntBASIC8.14□□□□□ -1.11
Trim35Q8C006 Gm11909-201ENSMUST00000121424 759 ntBASIC8.14□□□□□ -1.11
Trim35Q8C006 Gm15343-201ENSMUST00000136382 640 ntTSL 3 BASIC8.14□□□□□ -1.11
Trim35Q8C006 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC8.14□□□□□ -1.11
Trim35Q8C006 Gm24004-201ENSMUST00000158460 178 ntBASIC8.14□□□□□ -1.11
Trim35Q8C006 Gm25837-201ENSMUST00000158919 108 ntBASIC8.14□□□□□ -1.11
Trim35Q8C006 Vmn2r-ps87-201ENSMUST00000174393 876 ntBASIC8.14□□□□□ -1.11
Trim35Q8C006 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC8.14□□□□□ -1.11
Trim35Q8C006 2310005E17Rik-201ENSMUST00000186644 1187 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim35Q8C006 Gm29491-201ENSMUST00000189481 506 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim35Q8C006 Mef2c-225ENSMUST00000199210 1185 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim35Q8C006 Gm44018-201ENSMUST00000204471 407 ntBASIC8.14□□□□□ -1.11
Trim35Q8C006 Gm45353-201ENSMUST00000210581 252 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim35Q8C006 AC154785.1-201ENSMUST00000223280 572 ntBASIC8.14□□□□□ -1.11
Trim35Q8C006 Fabp5l2-201ENSMUST00000072582 408 ntBASIC8.14□□□□□ -1.11
Trim35Q8C006 Mir181b-2-201ENSMUST00000083644 89 ntBASIC8.14□□□□□ -1.11
Trim35Q8C006 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Trim35Q8C006 Pkd2l2-201ENSMUST00000014647 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim35Q8C006 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Trim35Q8C006 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim35Q8C006 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim35Q8C006 Slc44a1-202ENSMUST00000107645 2365 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim35Q8C006 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Trim35Q8C006 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim35Q8C006 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Trim35Q8C006 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Trim35Q8C006 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Trim35Q8C006 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Trim35Q8C006 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim35Q8C006 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Trim35Q8C006 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim35Q8C006 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim35Q8C006 Pramef6-201ENSMUST00000081645 1487 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
Trim35Q8C006 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim35Q8C006 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim35Q8C006 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim35Q8C006 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim35Q8C006 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim35Q8C006 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim35Q8C006 Duxbl2-201ENSMUST00000100810 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim35Q8C006 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Trim35Q8C006 Hrh2-201ENSMUST00000038101 2789 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim35Q8C006 Cnpy1-203ENSMUST00000120068 2284 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim35Q8C006 Gm45786-201ENSMUST00000213021 2278 ntBASIC8.13□□□□□ -1.11
Trim35Q8C006 Grip1-204ENSMUST00000105261 3608 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim35Q8C006 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim35Q8C006 Cwc22-205ENSMUST00000111824 2603 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim35Q8C006 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim35Q8C006 Gm12884-201ENSMUST00000120371 325 ntBASIC8.13□□□□□ -1.11
Trim35Q8C006 Gm12494-201ENSMUST00000121684 521 ntBASIC8.13□□□□□ -1.11
Trim35Q8C006 Gm11203-201ENSMUST00000122169 741 ntBASIC8.13□□□□□ -1.11
Trim35Q8C006 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC8.13□□□□□ -1.11
Trim35Q8C006 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC8.13□□□□□ -1.11
Trim35Q8C006 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim35Q8C006 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim35Q8C006 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim35Q8C006 Gm27197-201ENSMUST00000184325 479 ntTSL 3 BASIC8.13□□□□□ -1.11
Trim35Q8C006 Mir6401-201ENSMUST00000184499 109 ntBASIC8.13□□□□□ -1.11
Trim35Q8C006 Mir6922-201ENSMUST00000185099 66 ntBASIC8.13□□□□□ -1.11
Trim35Q8C006 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim35Q8C006 Gm28860-201ENSMUST00000188103 313 ntBASIC8.13□□□□□ -1.11
Trim35Q8C006 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC8.13□□□□□ -1.11
Trim35Q8C006 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim35Q8C006 Gm43315-201ENSMUST00000198120 313 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms