Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm38699-201ENSMUST00000221301 1740 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 AC158982.1-205ENSMUST00000227339 1876 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm20276-201ENSMUST00000216122 2648 ntBASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Gm11799-201ENSMUST00000116110 460 ntBASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Gm5383-201ENSMUST00000121177 617 ntBASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Mir3473g-201ENSMUST00000183494 136 ntBASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Gm37103-201ENSMUST00000191830 115 ntBASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Gm43624-201ENSMUST00000197368 180 ntBASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Gm45874-201ENSMUST00000212423 346 ntBASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 AC171206.1-201ENSMUST00000213612 213 ntBASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 AC154861.1-201ENSMUST00000223767 800 ntBASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Gm26442-201ENSMUST00000082588 153 ntBASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Sh3rf1Q69ZI1 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm37780-201ENSMUST00000194117 1873 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 AC167192.3-201ENSMUST00000224096 1567 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Fam26d-202ENSMUST00000218239 3075 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm23692-201ENSMUST00000101881 160 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm24430-201ENSMUST00000104077 104 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm24709-201ENSMUST00000104123 132 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm14756-201ENSMUST00000116395 240 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm13627-201ENSMUST00000119700 706 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm14991-201ENSMUST00000119913 598 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm12438-201ENSMUST00000122034 336 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm24435-201ENSMUST00000157886 110 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Cfap61-214ENSMUST00000167179 183 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm9587-201ENSMUST00000172449 454 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm22252-201ENSMUST00000179316 79 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm28885-201ENSMUST00000185615 563 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm28418-201ENSMUST00000186179 423 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm28404-201ENSMUST00000190242 453 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm37380-201ENSMUST00000193752 397 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm43631-201ENSMUST00000202011 369 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 AC134334.1-201ENSMUST00000214277 255 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm34005-201ENSMUST00000215834 282 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms