Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm17081-201ENSMUST00000167363 478 ntBASIC5.45□□□□□ -1.54
NcanP55066 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NcanP55066 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.45□□□□□ -1.54
NcanP55066 Gm24465-201ENSMUST00000178398 107 ntBASIC5.45□□□□□ -1.54
NcanP55066 Gm37343-201ENSMUST00000192542 111 ntBASIC5.45□□□□□ -1.54
NcanP55066 Gm44690-201ENSMUST00000207984 382 ntBASIC5.45□□□□□ -1.54
NcanP55066 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC5.45□□□□□ -1.54
NcanP55066 AC110816.1-201ENSMUST00000218559 980 ntBASIC5.45□□□□□ -1.54
NcanP55066 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC5.45□□□□□ -1.54
NcanP55066 AC134439.1-201ENSMUST00000220923 600 ntBASIC5.45□□□□□ -1.54
NcanP55066 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC5.45□□□□□ -1.54
NcanP55066 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.45□□□□□ -1.54
NcanP55066 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
NcanP55066 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
NcanP55066 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
NcanP55066 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
NcanP55066 Snora52-201ENSMUST00000082732 137 ntBASIC5.45□□□□□ -1.54
NcanP55066 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
NcanP55066 AC124586.1-201ENSMUST00000221673 2795 ntBASIC5.45□□□□□ -1.54
NcanP55066 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
NcanP55066 Gm44742-201ENSMUST00000207190 1412 ntBASIC5.45□□□□□ -1.54
NcanP55066 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
NcanP55066 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
NcanP55066 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC5.45□□□□□ -1.54
NcanP55066 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.45□□□□□ -1.54
NcanP55066 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NcanP55066 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NcanP55066 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
NcanP55066 Gm43178-201ENSMUST00000197257 1386 ntBASIC5.44□□□□□ -1.54
NcanP55066 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NcanP55066 Fam35a-206ENSMUST00000228626 3100 ntBASIC5.44□□□□□ -1.54
NcanP55066 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NcanP55066 Gm13771-201ENSMUST00000117988 238 ntBASIC5.44□□□□□ -1.54
NcanP55066 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC5.44□□□□□ -1.54
NcanP55066 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.44□□□□□ -1.54
NcanP55066 Gm8051-201ENSMUST00000120464 466 ntBASIC5.44□□□□□ -1.54
NcanP55066 Gm13024-201ENSMUST00000121756 718 ntBASIC5.44□□□□□ -1.54
NcanP55066 Gm11506-201ENSMUST00000122414 470 ntBASIC5.44□□□□□ -1.54
NcanP55066 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NcanP55066 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NcanP55066 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NcanP55066 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NcanP55066 Gm25572-201ENSMUST00000157527 172 ntBASIC5.44□□□□□ -1.54
NcanP55066 Gm26219-201ENSMUST00000175216 71 ntBASIC5.44□□□□□ -1.54
NcanP55066 Gm4845-201ENSMUST00000179202 562 ntBASIC5.44□□□□□ -1.54
NcanP55066 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC5.44□□□□□ -1.54
NcanP55066 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NcanP55066 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC5.44□□□□□ -1.54
NcanP55066 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NcanP55066 Gm18547-201ENSMUST00000192439 811 ntBASIC5.44□□□□□ -1.54
NcanP55066 Gm37961-201ENSMUST00000192729 299 ntBASIC5.44□□□□□ -1.54
NcanP55066 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NcanP55066 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC5.44□□□□□ -1.54
NcanP55066 Gm43350-201ENSMUST00000196382 711 ntBASIC5.44□□□□□ -1.54
NcanP55066 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NcanP55066 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.44□□□□□ -1.54
NcanP55066 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.44□□□□□ -1.54
NcanP55066 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC5.44□□□□□ -1.54
NcanP55066 Gm43843-201ENSMUST00000202396 1587 ntBASIC5.44□□□□□ -1.54
NcanP55066 Gm44138-201ENSMUST00000204939 271 ntBASIC5.44□□□□□ -1.54
NcanP55066 AC154241.1-201ENSMUST00000223952 356 ntBASIC5.44□□□□□ -1.54
NcanP55066 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NcanP55066 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
NcanP55066 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC5.44□□□□□ -1.54
NcanP55066 Gm10042-201ENSMUST00000079884 78 ntBASIC5.44□□□□□ -1.54
NcanP55066 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NcanP55066 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC5.44□□□□□ -1.54
NcanP55066 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NcanP55066 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.44□□□□□ -1.54
NcanP55066 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5.44□□□□□ -1.54
NcanP55066 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC5.44□□□□□ -1.54
NcanP55066 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.44□□□□□ -1.54
NcanP55066 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NcanP55066 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.44□□□□□ -1.54
NcanP55066 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
NcanP55066 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
NcanP55066 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
NcanP55066 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
NcanP55066 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.43□□□□□ -1.54
NcanP55066 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
NcanP55066 Gm37056-201ENSMUST00000192141 1865 ntBASIC5.43□□□□□ -1.54
NcanP55066 Gm7452-202ENSMUST00000202891 3039 ntBASIC5.43□□□□□ -1.54
NcanP55066 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NcanP55066 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NcanP55066 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
NcanP55066 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NcanP55066 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NcanP55066 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
NcanP55066 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
NcanP55066 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.43□□□□□ -1.54
NcanP55066 Gm37268-201ENSMUST00000192254 2614 ntBASIC5.43□□□□□ -1.54
NcanP55066 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.43□□□□□ -1.54
NcanP55066 Gm24581-201ENSMUST00000103962 133 ntBASIC5.43□□□□□ -1.54
NcanP55066 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC5.43□□□□□ -1.54
NcanP55066 Gm14933-201ENSMUST00000118840 481 ntBASIC5.43□□□□□ -1.54
NcanP55066 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
NcanP55066 Gm22637-201ENSMUST00000158144 283 ntBASIC5.43□□□□□ -1.54
NcanP55066 Gm23046-201ENSMUST00000158369 284 ntBASIC5.43□□□□□ -1.54
NcanP55066 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NcanP55066 Gm21909-201ENSMUST00000178260 439 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms