Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Cdx2P43241 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Cdx2P43241 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Cdx2P43241 AC121844.3-201ENSMUST00000219124 1785 ntBASIC4.73□□□□□ -1.65
Cdx2P43241 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Cdx2P43241 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Cdx2P43241 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC4.73□□□□□ -1.65
Cdx2P43241 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Cdx2P43241 AC102431.1-201ENSMUST00000223773 1449 ntBASIC4.72□□□□□ -1.65
Cdx2P43241 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
Cdx2P43241 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
Cdx2P43241 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC4.72□□□□□ -1.65
Cdx2P43241 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Cdx2P43241 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Cdx2P43241 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Cdx2P43241 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Cdx2P43241 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Cdx2P43241 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Cdx2P43241 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Cdx2P43241 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4.72□□□□□ -1.65
Cdx2P43241 Gm14878-201ENSMUST00000118167 293 ntBASIC4.72□□□□□ -1.65
Cdx2P43241 Gm12190-201ENSMUST00000120001 187 ntBASIC4.72□□□□□ -1.65
Cdx2P43241 Gm25913-201ENSMUST00000157617 135 ntBASIC4.72□□□□□ -1.65
Cdx2P43241 Gm23964-201ENSMUST00000157966 107 ntBASIC4.72□□□□□ -1.65
Cdx2P43241 Gm18128-201ENSMUST00000172625 511 ntBASIC4.72□□□□□ -1.65
Cdx2P43241 Gm27568-201ENSMUST00000184220 99 ntBASIC4.72□□□□□ -1.65
Cdx2P43241 Mir6391-201ENSMUST00000184391 104 ntBASIC4.72□□□□□ -1.65
Cdx2P43241 Gm27818-201ENSMUST00000184536 159 ntBASIC4.72□□□□□ -1.65
Cdx2P43241 Gm27781-201ENSMUST00000185185 92 ntBASIC4.72□□□□□ -1.65
Cdx2P43241 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.72□□□□□ -1.65
Cdx2P43241 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC4.72□□□□□ -1.65
Cdx2P43241 Gm37908-201ENSMUST00000195828 470 ntBASIC4.72□□□□□ -1.65
Cdx2P43241 AC136146.1-201ENSMUST00000196180 91 ntBASIC4.72□□□□□ -1.65
Cdx2P43241 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.72□□□□□ -1.65
Cdx2P43241 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.72□□□□□ -1.65
Cdx2P43241 Gm43968-201ENSMUST00000203388 389 ntBASIC4.72□□□□□ -1.65
Cdx2P43241 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC4.72□□□□□ -1.65
Cdx2P43241 Gm45845-201ENSMUST00000207326 582 ntBASIC4.72□□□□□ -1.65
Cdx2P43241 AC137127.3-201ENSMUST00000213340 349 ntBASIC4.72□□□□□ -1.65
Cdx2P43241 Gm4263-201ENSMUST00000220693 1101 ntBASIC4.72□□□□□ -1.65
Cdx2P43241 Gm23875-201ENSMUST00000083711 318 ntBASIC4.72□□□□□ -1.65
Cdx2P43241 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Cdx2P43241 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Cdx2P43241 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Cdx2P43241 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.72□□□□□ -1.65
Cdx2P43241 AC123705.3-201ENSMUST00000223531 2069 ntBASIC4.72□□□□□ -1.65
Cdx2P43241 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Cdx2P43241 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Cdx2P43241 Gm37677-201ENSMUST00000194520 7634 ntBASIC4.72□□□□□ -1.65
Cdx2P43241 Gm37217-201ENSMUST00000194017 3521 ntBASIC4.72□□□□□ -1.65
Cdx2P43241 Gm37781-201ENSMUST00000194773 3218 ntBASIC4.72□□□□□ -1.65
Cdx2P43241 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Cdx2P43241 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Cdx2P43241 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC4.72□□□□□ -1.65
Cdx2P43241 Gm37356-201ENSMUST00000193362 1613 ntBASIC4.72□□□□□ -1.65
Cdx2P43241 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Cdx2P43241 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Cdx2P43241 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Cdx2P43241 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Cdx2P43241 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Cdx2P43241 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
Cdx2P43241 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Cdx2P43241 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Cdx2P43241 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Cdx2P43241 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Cdx2P43241 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx2P43241 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Cdx2P43241 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx2P43241 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx2P43241 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx2P43241 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Cdx2P43241 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Cdx2P43241 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Cdx2P43241 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Cdx2P43241 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Cdx2P43241 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC4.71□□□□□ -1.66
Cdx2P43241 Gm13733-201ENSMUST00000117290 535 ntBASIC4.71□□□□□ -1.66
Cdx2P43241 Gm12186-201ENSMUST00000119050 945 ntBASIC4.71□□□□□ -1.66
Cdx2P43241 Gm14688-201ENSMUST00000119169 303 ntBASIC4.71□□□□□ -1.66
Cdx2P43241 Defa-ps14-201ENSMUST00000121373 418 ntBASIC4.71□□□□□ -1.66
Cdx2P43241 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC4.71□□□□□ -1.66
Cdx2P43241 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx2P43241 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx2P43241 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC4.71□□□□□ -1.66
Cdx2P43241 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.71□□□□□ -1.66
Cdx2P43241 Gm44138-201ENSMUST00000204939 271 ntBASIC4.71□□□□□ -1.66
Cdx2P43241 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC4.71□□□□□ -1.66
Cdx2P43241 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC4.71□□□□□ -1.66
Cdx2P43241 CT009600.2-201ENSMUST00000226638 481 ntBASIC4.71□□□□□ -1.66
Cdx2P43241 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx2P43241 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx2P43241 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Cdx2P43241 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx2P43241 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx2P43241 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC4.71□□□□□ -1.66
Cdx2P43241 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC4.71□□□□□ -1.66
Cdx2P43241 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC4.71□□□□□ -1.66
Cdx2P43241 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Cdx2P43241 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx2P43241 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms