Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 AC154335.2-201ENSMUST00000225916 638 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col2a1P28481 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Col2a1P28481 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.51□□□□□ -1.53
Col2a1P28481 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col2a1P28481 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col2a1P28481 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Col2a1P28481 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.5□□□□□ -1.53
Col2a1P28481 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Col2a1P28481 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col2a1P28481 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col2a1P28481 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Col2a1P28481 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
Col2a1P28481 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Col2a1P28481 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col2a1P28481 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.5□□□□□ -1.53
Col2a1P28481 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Col2a1P28481 Gm15786-201ENSMUST00000121079 450 ntBASIC5.5□□□□□ -1.53
Col2a1P28481 Gm13220-201ENSMUST00000121535 508 ntBASIC5.5□□□□□ -1.53
Col2a1P28481 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC5.5□□□□□ -1.53
Col2a1P28481 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC5.5□□□□□ -1.53
Col2a1P28481 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Col2a1P28481 Gm22177-201ENSMUST00000175002 158 ntBASIC5.5□□□□□ -1.53
Col2a1P28481 Gm21816-201ENSMUST00000179255 360 ntBASIC5.5□□□□□ -1.53
Col2a1P28481 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.5□□□□□ -1.53
Col2a1P28481 Gm37614-201ENSMUST00000195645 210 ntBASIC5.5□□□□□ -1.53
Col2a1P28481 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC5.5□□□□□ -1.53
Col2a1P28481 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.5□□□□□ -1.53
Col2a1P28481 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.5□□□□□ -1.53
Col2a1P28481 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col2a1P28481 Gm19095-201ENSMUST00000220533 730 ntBASIC5.5□□□□□ -1.53
Col2a1P28481 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Col2a1P28481 Mecom-201ENSMUST00000061088 348 ntBASIC5.5□□□□□ -1.53
Col2a1P28481 n-R5s168-201ENSMUST00000083948 104 ntBASIC5.5□□□□□ -1.53
Col2a1P28481 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col2a1P28481 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Col2a1P28481 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col2a1P28481 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.5□□□□□ -1.53
Col2a1P28481 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Col2a1P28481 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col2a1P28481 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.49□□□□□ -1.53
Col2a1P28481 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Col2a1P28481 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
Col2a1P28481 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.49□□□□□ -1.53
Col2a1P28481 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col2a1P28481 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col2a1P28481 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Col2a1P28481 Igkv11-106-201ENSMUST00000103331 346 ntBASIC5.49□□□□□ -1.53
Col2a1P28481 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC5.49□□□□□ -1.53
Col2a1P28481 Gm24444-201ENSMUST00000157244 308 ntBASIC5.49□□□□□ -1.53
Col2a1P28481 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC5.49□□□□□ -1.53
Col2a1P28481 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col2a1P28481 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col2a1P28481 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col2a1P28481 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Col2a1P28481 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col2a1P28481 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col2a1P28481 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col2a1P28481 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col2a1P28481 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Col2a1P28481 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.48□□□□□ -1.53
Col2a1P28481 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.48□□□□□ -1.53
Col2a1P28481 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col2a1P28481 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.48□□□□□ -1.53
Col2a1P28481 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Col2a1P28481 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.48□□□□□ -1.53
Col2a1P28481 Gm37902-201ENSMUST00000192839 1683 ntBASIC5.48□□□□□ -1.53
Col2a1P28481 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.48□□□□□ -1.53
Col2a1P28481 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.48□□□□□ -1.53
Col2a1P28481 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Col2a1P28481 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col2a1P28481 Gm23115-201ENSMUST00000158480 108 ntBASIC5.48□□□□□ -1.53
Col2a1P28481 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC5.48□□□□□ -1.53
Col2a1P28481 Gm27834-201ENSMUST00000183427 125 ntBASIC5.48□□□□□ -1.53
Col2a1P28481 Dlx6os1-204ENSMUST00000184182 146 ntBASIC5.48□□□□□ -1.53
Col2a1P28481 Gm4854-201ENSMUST00000185902 574 ntBASIC5.48□□□□□ -1.53
Col2a1P28481 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC5.48□□□□□ -1.53
Col2a1P28481 Gm18258-201ENSMUST00000210413 542 ntBASIC5.48□□□□□ -1.53
Col2a1P28481 AC156832.3-201ENSMUST00000215591 435 ntBASIC5.48□□□□□ -1.53
Col2a1P28481 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col2a1P28481 Gm18442-201ENSMUST00000220925 639 ntBASIC5.48□□□□□ -1.53
Col2a1P28481 AC121804.1-201ENSMUST00000221016 394 ntBASIC5.48□□□□□ -1.53
Col2a1P28481 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC5.48□□□□□ -1.53
Col2a1P28481 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Col2a1P28481 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC5.48□□□□□ -1.53
Col2a1P28481 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col2a1P28481 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col2a1P28481 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.48□□□□□ -1.53
Col2a1P28481 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col2a1P28481 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col2a1P28481 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col2a1P28481 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.47□□□□□ -1.53
Col2a1P28481 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Col2a1P28481 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Col2a1P28481 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Col2a1P28481 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.47□□□□□ -1.53
Col2a1P28481 Gm12893-201ENSMUST00000121732 275 ntBASIC5.47□□□□□ -1.53
Col2a1P28481 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col2a1P28481 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms