Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col1a1P11087 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col1a1P11087 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
Col1a1P11087 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col1a1P11087 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col1a1P11087 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col1a1P11087 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col1a1P11087 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col1a1P11087 Gm26300-201ENSMUST00000102282 94 ntBASIC5.68□□□□□ -1.5
Col1a1P11087 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col1a1P11087 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC5.68□□□□□ -1.5
Col1a1P11087 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col1a1P11087 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col1a1P11087 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col1a1P11087 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC5.68□□□□□ -1.5
Col1a1P11087 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Col1a1P11087 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.68□□□□□ -1.5
Col1a1P11087 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Col1a1P11087 Gm19807-201ENSMUST00000173971 667 ntBASIC5.68□□□□□ -1.5
Col1a1P11087 Gm38053-201ENSMUST00000193938 160 ntBASIC5.68□□□□□ -1.5
Col1a1P11087 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC5.68□□□□□ -1.5
Col1a1P11087 AC131720.3-201ENSMUST00000219113 275 ntBASIC5.68□□□□□ -1.5
Col1a1P11087 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.68□□□□□ -1.5
Col1a1P11087 AC183096.1-201ENSMUST00000226392 130 ntBASIC5.68□□□□□ -1.5
Col1a1P11087 Olfr480-201ENSMUST00000071658 1029 ntBASIC5.68□□□□□ -1.5
Col1a1P11087 Mir338-201ENSMUST00000083666 98 ntBASIC5.68□□□□□ -1.5
Col1a1P11087 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC5.68□□□□□ -1.5
Col1a1P11087 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col1a1P11087 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col1a1P11087 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col1a1P11087 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
Col1a1P11087 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col1a1P11087 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col1a1P11087 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Col1a1P11087 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col1a1P11087 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.67□□□□□ -1.5
Col1a1P11087 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.67□□□□□ -1.5
Col1a1P11087 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col1a1P11087 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col1a1P11087 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col1a1P11087 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col1a1P11087 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col1a1P11087 Gm14750-201ENSMUST00000118262 516 ntBASIC5.67□□□□□ -1.5
Col1a1P11087 Gm13132-201ENSMUST00000121194 472 ntBASIC5.67□□□□□ -1.5
Col1a1P11087 Gm22204-201ENSMUST00000122654 327 ntBASIC5.67□□□□□ -1.5
Col1a1P11087 Gm22637-201ENSMUST00000158144 283 ntBASIC5.67□□□□□ -1.5
Col1a1P11087 Gm22119-201ENSMUST00000175594 99 ntBASIC5.67□□□□□ -1.5
Col1a1P11087 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Col1a1P11087 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col1a1P11087 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC5.67□□□□□ -1.5
Col1a1P11087 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC5.67□□□□□ -1.5
Col1a1P11087 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC5.67□□□□□ -1.5
Col1a1P11087 AC154305.1-201ENSMUST00000224443 450 ntBASIC5.67□□□□□ -1.5
Col1a1P11087 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col1a1P11087 Gm37764-201ENSMUST00000194664 2150 ntBASIC5.67□□□□□ -1.5
Col1a1P11087 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col1a1P11087 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col1a1P11087 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col1a1P11087 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col1a1P11087 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col1a1P11087 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC5.67□□□□□ -1.5
Col1a1P11087 AC156163.1-201ENSMUST00000215598 3369 ntBASIC5.67□□□□□ -1.5
Col1a1P11087 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col1a1P11087 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC5.66□□□□□ -1.5
Col1a1P11087 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col1a1P11087 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col1a1P11087 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col1a1P11087 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Col1a1P11087 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.66□□□□□ -1.5
Col1a1P11087 Llph-ps1-201ENSMUST00000121281 390 ntBASIC5.66□□□□□ -1.5
Col1a1P11087 Llph-ps2-201ENSMUST00000122000 393 ntBASIC5.66□□□□□ -1.5
Col1a1P11087 Gm22819-201ENSMUST00000157445 303 ntBASIC5.66□□□□□ -1.5
Col1a1P11087 Gm23905-201ENSMUST00000157568 109 ntBASIC5.66□□□□□ -1.5
Col1a1P11087 Gm24689-201ENSMUST00000157760 104 ntBASIC5.66□□□□□ -1.5
Col1a1P11087 Gm3077-201ENSMUST00000165903 627 ntBASIC5.66□□□□□ -1.5
Col1a1P11087 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Col1a1P11087 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Col1a1P11087 Dlx6os1-204ENSMUST00000184182 146 ntBASIC5.66□□□□□ -1.5
Col1a1P11087 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col1a1P11087 Gm18177-201ENSMUST00000188373 404 ntBASIC5.66□□□□□ -1.5
Col1a1P11087 Gm38360-201ENSMUST00000195130 454 ntBASIC5.66□□□□□ -1.5
Col1a1P11087 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC5.66□□□□□ -1.5
Col1a1P11087 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC5.66□□□□□ -1.5
Col1a1P11087 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col1a1P11087 Gm44742-201ENSMUST00000207190 1412 ntBASIC5.66□□□□□ -1.5
Col1a1P11087 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col1a1P11087 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Col1a1P11087 Gm44434-201ENSMUST00000203918 3745 ntBASIC5.66□□□□□ -1.5
Col1a1P11087 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col1a1P11087 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Col1a1P11087 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col1a1P11087 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
Col1a1P11087 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col1a1P11087 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Col1a1P11087 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col1a1P11087 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.66□□□□□ -1.5
Col1a1P11087 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col1a1P11087 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.66□□□□□ -1.5
Col1a1P11087 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Col1a1P11087 Gm42551-201ENSMUST00000197701 1573 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms