Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm25989-201ENSMUST00000158761 133 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm8183-201ENSMUST00000183134 980 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm37203-201ENSMUST00000191618 385 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm3933-201ENSMUST00000195391 439 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm1969-201ENSMUST00000198125 1220 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm42850-201ENSMUST00000202094 201 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm3189-201ENSMUST00000205595 832 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm18672-201ENSMUST00000208035 270 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm44754-201ENSMUST00000208155 400 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm18559-201ENSMUST00000208249 604 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm45626-201ENSMUST00000210093 361 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 AC125020.2-201ENSMUST00000218894 348 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 AC144798.1-201ENSMUST00000228120 391 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 n-R5s41-201ENSMUST00000083025 119 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Mir325-201ENSMUST00000083491 98 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm24765-201ENSMUST00000083691 103 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Mir465c-1-201ENSMUST00000093560 81 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm38699-201ENSMUST00000221301 1740 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm43092-201ENSMUST00000202986 1854 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm14510-201ENSMUST00000116165 1092 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm12442-201ENSMUST00000118372 338 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm7916-201ENSMUST00000120325 456 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm7746-201ENSMUST00000120966 503 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm12332-201ENSMUST00000121397 922 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm23792-201ENSMUST00000122557 93 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm9498-201ENSMUST00000140849 291 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm23674-201ENSMUST00000157473 131 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Mir1945-201ENSMUST00000157919 78 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm22733-201ENSMUST00000158094 91 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm20453-201ENSMUST00000173968 226 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm9892-201ENSMUST00000182415 992 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm27342-201ENSMUST00000183530 109 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Mir6951-201ENSMUST00000183910 75 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm18702-201ENSMUST00000196923 588 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm42465-201ENSMUST00000197036 492 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm8479-201ENSMUST00000203825 718 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm30646-201ENSMUST00000207662 180 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm19196-201ENSMUST00000209258 357 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm45400-201ENSMUST00000211603 653 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm19232-201ENSMUST00000211621 652 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms